Protein–RNA interactions for Protein: Q96DT6

ATG4C, Cysteine protease ATG4C, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4CQ96DT6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4CQ96DT6 Y_RNA.692-201ENST00000516627 105 ntBASIC2.72□□□□□ -1.97
ATG4CQ96DT6 IGKV3-31-201ENST00000523109 329 ntBASIC2.72□□□□□ -1.97
ATG4CQ96DT6 MIR1273D-201ENST00000577266 86 ntBASIC2.72□□□□□ -1.97
ATG4CQ96DT6 AC069114.2-201ENST00000604699 304 ntBASIC2.72□□□□□ -1.97
ATG4CQ96DT6 MIR7843-201ENST00000622274 79 ntBASIC2.72□□□□□ -1.97
ATG4CQ96DT6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4CQ96DT6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4CQ96DT6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.97
ATG4CQ96DT6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ATG4CQ96DT6 RNU11-3P-201ENST00000391111 133 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 Y_RNA.629-201ENST00000411368 105 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 RNU1-104P-201ENST00000517280 175 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 AC007751.1-201ENST00000529260 376 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 MIR4762-201ENST00000585261 75 ntBASIC2.71□□□□□ -1.98
ATG4CQ96DT6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.71□□□□□ -1.98
ATG4CQ96DT6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.71□□□□□ -1.98
ATG4CQ96DT6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.71□□□□□ -1.98
ATG4CQ96DT6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4CQ96DT6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4CQ96DT6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
ATG4CQ96DT6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.7□□□□□ -1.98
ATG4CQ96DT6 U8.1-201ENST00000362843 134 ntBASIC2.7□□□□□ -1.98
ATG4CQ96DT6 U8.5-201ENST00000364528 136 ntBASIC2.7□□□□□ -1.98
ATG4CQ96DT6 AC069257.2-201ENST00000441819 155 ntBASIC2.7□□□□□ -1.98
ATG4CQ96DT6 UBL5P3-201ENST00000475112 231 ntBASIC2.7□□□□□ -1.98
ATG4CQ96DT6 AC084364.2-201ENST00000546924 395 ntBASIC2.7□□□□□ -1.98
ATG4CQ96DT6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ATG4CQ96DT6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4CQ96DT6 RNU6-888P-201ENST00000363010 101 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 SNORD14E-201ENST00000364009 85 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 SNORD61-201ENST00000384252 73 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ATG4CQ96DT6 RNA5SP109-201ENST00000391010 116 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4CQ96DT6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4CQ96DT6 RN7SKP179-201ENST00000516126 217 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 Y_RNA.666-201ENST00000516187 112 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 MIR4658-201ENST00000584344 65 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 AC067747.1-201ENST00000608026 250 ntBASIC2.69□□□□□ -1.98
ATG4CQ96DT6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4CQ96DT6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4CQ96DT6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ATG4CQ96DT6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.68□□□□□ -1.98
ATG4CQ96DT6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 RNU6-442P-201ENST00000383968 104 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 MIR504-201ENST00000385065 83 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 SNRPGP13-201ENST00000442212 177 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 AL606517.2-201ENST00000442855 241 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.68□□□□□ -1.98
ATG4CQ96DT6 RNU6-693P-201ENST00000516134 107 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 AC090049.2-201ENST00000550377 109 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 MIR5094-201ENST00000578766 85 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 MIR3129-201ENST00000581095 76 ntBASIC2.68□□□□□ -1.98
ATG4CQ96DT6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.68□□□□□ -1.98
ATG4CQ96DT6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4CQ96DT6 SNORA1-201ENST00000384107 130 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 RNU6-440P-201ENST00000390882 105 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 RNA5SP465-201ENST00000391195 109 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 AL603914.1-201ENST00000401964 204 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 RNU6-659P-201ENST00000516454 104 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4CQ96DT6 MIR5007-201ENST00000583098 95 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 SNORA28-201ENST00000606769 126 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 MIR8054-201ENST00000620877 86 ntBASIC2.67□□□□□ -1.98
ATG4CQ96DT6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4CQ96DT6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4CQ96DT6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4CQ96DT6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
ATG4CQ96DT6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ATG4CQ96DT6 Y_RNA.273-201ENST00000364703 102 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 MIR597-201ENST00000384968 97 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 MIR891A-201ENST00000401237 79 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 MIR1289-2-201ENST00000408360 111 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 RPS12P2-201ENST00000439728 269 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 MTATP6P21-201ENST00000440681 189 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 Y_RNA.690-201ENST00000516603 95 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 AC007336.1-201ENST00000576365 3828 ntBASIC2.66□□□□□ -1.98
ATG4CQ96DT6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.66□□□□□ -1.98
ATG4CQ96DT6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG4CQ96DT6 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 MIR518A2-201ENST00000384966 87 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 SNORD45.4-201ENST00000516629 73 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ATG4CQ96DT6 MIR3121-201ENST00000579680 77 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.65□□□□□ -1.99
ATG4CQ96DT6 AC006441.5-201ENST00000612680 209 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 MIR6873-201ENST00000622788 63 ntBASIC2.65□□□□□ -1.99
ATG4CQ96DT6 Y_RNA.294-201ENST00000364916 102 ntBASIC2.64□□□□□ -1.99
ATG4CQ96DT6 Y_RNA.336-201ENST00000365307 109 ntBASIC2.64□□□□□ -1.99
ATG4CQ96DT6 RNU6-950P-201ENST00000384651 107 ntBASIC2.64□□□□□ -1.99
ATG4CQ96DT6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
ATG4CQ96DT6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms