Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.441-201ENST00000384123 112 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 MIR522-201ENST00000385071 87 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 MIR802-201ENST00000390235 94 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 SNORA12.1-201ENST00000390873 148 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 RNA5SP100-201ENST00000410903 110 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 RNA5SP59-201ENST00000410922 110 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 SEPT7P4-201ENST00000437076 306 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 SNRPGP8-201ENST00000454064 226 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
CTHRC1Q96CG8 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 RNU6-1135P-201ENST00000411083 103 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 RPL30P13-201ENST00000418873 348 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 AC107027.2-201ENST00000512197 115 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 SNORD77.4-201ENST00000516158 81 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 SNORA31.10-201ENST00000516482 106 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 RNU7-149P-201ENST00000516739 59 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 MIR4709-201ENST00000577272 72 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 MIR4762-201ENST00000585261 75 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
CTHRC1Q96CG8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CTHRC1Q96CG8 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 SNORD45.3-201ENST00000363836 72 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 U8.5-201ENST00000364528 136 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 RNU6-1138P-201ENST00000365359 106 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 RNU4-43P-201ENST00000410628 137 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 RNU2-70P-201ENST00000410718 179 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 AC006461.1-201ENST00000412637 326 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 RNU6-561P-201ENST00000516222 102 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 AC104465.1-201ENST00000611365 139 ntBASIC1.9□□□□□ -2.11
CTHRC1Q96CG8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU4-84P-201ENST00000364200 139 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.272-201ENST00000364696 102 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.337-201ENST00000365312 102 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 SNORA4.2-201ENST00000365313 147 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU6-643P-201ENST00000384018 107 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU6-360P-201ENST00000390944 104 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU6-239P-201ENST00000390990 99 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU6-394P-201ENST00000410735 107 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU7-34P-201ENST00000459394 64 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 NDUFA4P2-201ENST00000489989 244 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNA5SP153-201ENST00000516498 76 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNU6-1212P-201ENST00000517023 104 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CTHRC1Q96CG8 SNORD14E-201ENST00000364009 85 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 UBL5P3-201ENST00000475112 231 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 SNORD45.4-201ENST00000516629 73 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 RNU6-197P-201ENST00000516680 100 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 RNU6-365P-201ENST00000517113 106 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AL160236.1-201ENST00000556317 195 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AC008507.4-201ENST00000585464 127 ntBASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
CTHRC1Q96CG8 RNU6-163P-201ENST00000384396 106 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.521-201ENST00000384560 114 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 RNU5E-9P-201ENST00000411164 104 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 RNU6-237P-201ENST00000515985 71 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 RNU1-97P-201ENST00000516872 164 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 MIR3144-201ENST00000579460 79 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
CTHRC1Q96CG8 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms