Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU6-711P-201ENST00000517255 106 ntBASIC4.91□□□□□ -1.62
TRIM41Q8WV44 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM41Q8WV44 AC022523.2-201ENST00000561045 150 ntBASIC4.91□□□□□ -1.62
TRIM41Q8WV44 AC110079.1-202ENST00000635213 138 ntBASIC4.91□□□□□ -1.62
TRIM41Q8WV44 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM41Q8WV44 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM41Q8WV44 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM41Q8WV44 ZNF720P1-201ENST00000562403 1939 ntBASIC4.9□□□□□ -1.62
TRIM41Q8WV44 MIR148B-201ENST00000362252 99 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 RNU6-349P-201ENST00000362402 107 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.78-201ENST00000362970 110 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.107-201ENST00000363190 121 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 RNU1-133P-201ENST00000364867 167 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 RNU6-851P-201ENST00000384565 107 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 MIR27B-201ENST00000385129 97 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM41Q8WV44 RNA5SP323-201ENST00000391094 133 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 RNU7-128P-201ENST00000517247 62 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM41Q8WV44 MIR7153-201ENST00000637758 57 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM41Q8WV44 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
TRIM41Q8WV44 AC096644.4-201ENST00000563417 2912 ntBASIC4.9□□□□□ -1.63
TRIM41Q8WV44 AC008264.2-201ENST00000610193 3731 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.332-201ENST00000365271 113 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 RNY1P6-201ENST00000384193 109 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 RN7SKP223-201ENST00000410582 62 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 AL049830.1-201ENST00000468034 425 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM41Q8WV44 MIR5739-201ENST00000619803 80 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.89□□□□□ -1.63
TRIM41Q8WV44 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM41Q8WV44 RNU6-1084P-201ENST00000362498 107 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 RNU1-23P-201ENST00000363361 144 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 SNORD14E-201ENST00000364009 85 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 SNORD6-201ENST00000365444 73 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 MIR522-201ENST00000385071 87 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 RNU7-123P-201ENST00000515911 60 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 RNU1-142P-201ENST00000516682 145 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 RNU6-158P-201ENST00000517104 100 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 MIR7515-201ENST00000637837 67 ntBASIC4.88□□□□□ -1.63
TRIM41Q8WV44 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM41Q8WV44 MIR302B-201ENST00000362188 73 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 RNA5SP289-201ENST00000362332 137 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 RNA5SP295-201ENST00000362655 121 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 SNORA25.9-201ENST00000365087 128 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.342-201ENST00000365352 113 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 RNU6-1104P-201ENST00000384723 104 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 SCARNA3-201ENST00000517097 143 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 SCARNA11.3-201ENST00000517276 130 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 AC026421.1-201ENST00000519101 163 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 MIR3163-201ENST00000581592 73 ntBASIC4.87□□□□□ -1.63
TRIM41Q8WV44 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM41Q8WV44 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM41Q8WV44 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM41Q8WV44 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM41Q8WV44 SNORA1B-201ENST00000362535 133 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 RNU6-859P-201ENST00000362728 107 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 SNORD115-28-201ENST00000363931 81 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 RNU6-442P-201ENST00000383968 104 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 RNU6-1328P-201ENST00000410938 106 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 FTH1P12-201ENST00000432137 551 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 AC109327.2-201ENST00000448339 378 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 SNORD36C-201ENST00000516733 66 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 SNORA18.7-201ENST00000516910 131 ntBASIC4.86□□□□□ -1.63
TRIM41Q8WV44 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
TRIM41Q8WV44 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM41Q8WV44 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM41Q8WV44 MIR340-201ENST00000362125 95 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.37-201ENST00000362606 108 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.93-201ENST00000363066 109 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 Y_RNA.178-201ENST00000363832 102 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 DEFB131E-201ENST00000532329 154 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 AL162726.3-218ENST00000636401 95 ntBASIC4.85□□□□□ -1.63
TRIM41Q8WV44 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM41Q8WV44 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM41Q8WV44 RNU4-36P-201ENST00000364294 144 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 RNU6-816P-201ENST00000390914 107 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 RNU6-1268P-201ENST00000391214 107 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 RNU6-1239P-201ENST00000391310 107 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 MICF-203ENST00000432679 129 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 RNU1-131P-201ENST00000458943 161 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 RNU7-6P-201ENST00000516845 62 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 AC245166.1-201ENST00000521012 253 ntBASIC4.84□□□□□ -1.63
TRIM41Q8WV44 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM41Q8WV44 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM41Q8WV44 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM41Q8WV44 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM41Q8WV44 MIR342-201ENST00000362212 99 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 MIR337-201ENST00000362281 93 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 SNORD114-1-201ENST00000362705 72 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 SNORA14A-201ENST00000364773 135 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 SNORA8-201ENST00000384574 139 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM41Q8WV44 AL445646.1-201ENST00000431784 216 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 RN7SL75P-201ENST00000461926 281 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 AL358944.1-201ENST00000528537 144 ntBASIC4.83□□□□□ -1.64
TRIM41Q8WV44 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms