Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SNORA20-201ENST00000384662 132 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 MIR518A2-201ENST00000384966 87 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 HMGN2P39-201ENST00000398005 273 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 RNU2-51P-201ENST00000410708 197 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 SNORA18.4-201ENST00000516440 124 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 MIR1273D-201ENST00000577266 86 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-1084P-201ENST00000362498 107 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.66-201ENST00000362862 102 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 RNU1-51P-201ENST00000365345 176 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-442P-201ENST00000383968 104 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.542-201ENST00000384641 111 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-460P-201ENST00000391158 108 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 AC008267.6-201ENST00000441664 139 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-313P-201ENST00000516317 112 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 MIR5094-201ENST00000578766 85 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 AC131055.1-201ENST00000584626 316 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 AL365205.2-201ENST00000594586 68 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 U7.2-201ENST00000607576 63 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 AC010297.1-201ENST00000623948 149 ntBASIC2.41□□□□□ -2.02
SH3RF2Q8TEC5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
SH3RF2Q8TEC5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.02
SH3RF2Q8TEC5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SH3RF2Q8TEC5 Z82195.2-201ENST00000612348 18351 ntBASIC2.4□□□□□ -2.02
SH3RF2Q8TEC5 SNORD14E-201ENST00000364009 85 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 MIR597-201ENST00000384968 97 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 SNORD72-201ENST00000390994 80 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 MIR1283-2-201ENST00000408621 87 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 RN7SKP200-201ENST00000410564 320 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 RNA5SP127-201ENST00000411051 133 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 snoU13.26-201ENST00000459452 105 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 UBL5P3-201ENST00000475112 231 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 AC011603.4-201ENST00000611325 277 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 MIR8054-201ENST00000620877 86 ntBASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.4□□□□□ -2.03
SH3RF2Q8TEC5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-888P-201ENST00000363010 101 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 SNORD18B-201ENST00000365659 72 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 MIR624-201ENST00000385217 97 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-440P-201ENST00000390882 105 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 RNA5SP109-201ENST00000391010 116 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 SNRPGP13-201ENST00000442212 177 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 AL606517.2-201ENST00000442855 241 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 Y_RNA.757-201ENST00000578934 114 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.39□□□□□ -2.03
SH3RF2Q8TEC5 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNA5SP432-201ENST00000362480 116 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 Y_RNA.120-201ENST00000363304 110 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-915P-201ENST00000364943 103 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-1168P-201ENST00000390831 104 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-1154P-201ENST00000391001 104 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 HMGN2P32-201ENST00000444648 269 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-1211P-201ENST00000459179 105 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-971P-201ENST00000516920 106 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 U1.36-201ENST00000620684 176 ntBASIC2.38□□□□□ -2.03
SH3RF2Q8TEC5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 SNORD50B-201ENST00000364995 70 ntBASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-1292P-201ENST00000383856 107 ntBASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 SNORA48.1-201ENST00000390879 135 ntBASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 RNU1-104P-201ENST00000517280 175 ntBASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 AC007751.1-201ENST00000529260 376 ntBASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.37□□□□□ -2.03
SH3RF2Q8TEC5 SNORA63D-201ENST00000364359 132 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-80P-201ENST00000384195 107 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 SNORD61-201ENST00000384252 73 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 MIR520A-201ENST00000384862 85 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 AL034345.1-201ENST00000407768 123 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 STAG3L5P-204ENST00000443759 179 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 RNU6-693P-201ENST00000516134 107 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 Y_RNA.692-201ENST00000516627 105 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 SNORD45.4-201ENST00000516629 73 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 AC006441.5-201ENST00000612680 209 ntBASIC2.36□□□□□ -2.03
SH3RF2Q8TEC5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms