Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.55□□□□□ -2
TTC9BQ8N6N2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
TTC9BQ8N6N2 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
TTC9BQ8N6N2 MIR494-201ENST00000349529 81 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 Y_RNA.49-201ENST00000362714 112 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 Y_RNA.544-201ENST00000384650 113 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 SNORD77.3-201ENST00000391113 65 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 SNRPGP10-201ENST00000432323 225 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.54□□□□□ -2
TTC9BQ8N6N2 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.54□□□□□ -2
TTC9BQ8N6N2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.54□□□□□ -2
TTC9BQ8N6N2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
TTC9BQ8N6N2 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 Y_RNA.220-201ENST00000364244 109 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 Y_RNA.323-201ENST00000365157 109 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 MIR548A2-201ENST00000384956 97 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 MT-TI-201ENST00000387365 69 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 RNU6-1275P-201ENST00000391087 107 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 MIR1253-201ENST00000408273 105 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 HMGN2P34-201ENST00000437647 269 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 RN7SKP12-201ENST00000516275 143 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 RNU6-830P-201ENST00000516353 107 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 RNU6-126P-201ENST00000516685 103 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 SCARNA15-202ENST00000516881 127 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.53□□□□□ -2
TTC9BQ8N6N2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2
TTC9BQ8N6N2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
TTC9BQ8N6N2 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
TTC9BQ8N6N2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TTC9BQ8N6N2 RNU1-72P-201ENST00000362976 153 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 RNU6-486P-201ENST00000363116 107 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 RNU6-1113P-201ENST00000384348 107 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 RNA5SP112-201ENST00000515937 99 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 RNU6-638P-201ENST00000516582 104 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 RNU6-586P-201ENST00000517265 104 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TTC9BQ8N6N2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RNU6-888P-201ENST00000363010 101 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 U8.2-201ENST00000363156 134 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RNU6-690P-201ENST00000365242 106 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RNU1-109P-201ENST00000383960 147 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RPS3AP1-201ENST00000413190 320 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 HMGN1P7-201ENST00000491722 313 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RNU6-113P-201ENST00000516653 101 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 RNU6-94P-201ENST00000607728 107 ntBASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.51□□□□□ -2.01
TTC9BQ8N6N2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 Y_RNA.198-201ENST00000364013 98 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 MIR592-201ENST00000384959 97 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 MIR518F-201ENST00000384973 87 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 MIR218-1-201ENST00000384999 110 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 RNU6-991P-201ENST00000516168 107 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 AC068339.1-201ENST00000526965 141 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 MIR5009-201ENST00000578736 100 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 SNORD115-40-201ENST00000606510 82 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 MALAT1.1-201ENST00000618249 95 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
TTC9BQ8N6N2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 Y_RNA.213-201ENST00000364178 111 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 RNU6-1134P-201ENST00000365156 101 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 RN7SKP223-201ENST00000410582 62 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 SNRPGP13-201ENST00000442212 177 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 SUMO2P16-201ENST00000519475 264 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 AC022523.2-201ENST00000561045 150 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 AC008507.4-201ENST00000585464 127 ntBASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
TTC9BQ8N6N2 MIR126-201ENST00000362291 85 ntBASIC2.48□□□□□ -2.01
TTC9BQ8N6N2 Y_RNA.344-201ENST00000365381 112 ntBASIC2.48□□□□□ -2.01
TTC9BQ8N6N2 SNORD24-201ENST00000383884 75 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms