Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR4709-201ENST00000577272 72 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 MIR5688-201ENST00000580619 83 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AC006006.1-201ENST00000603082 144 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 SNORA28-201ENST00000606769 126 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AL442067.1-201ENST00000613261 223 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 SNORA20.1-201ENST00000364790 130 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 MIR526A2-201ENST00000390198 65 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 RNU6-1271P-201ENST00000517049 105 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
VPS52Q8N1B4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS52Q8N1B4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS52Q8N1B4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VPS52Q8N1B4 RNU4-41P-201ENST00000364426 143 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 U8.5-201ENST00000364528 136 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 MIR194-1-201ENST00000384892 85 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 AL034345.1-201ENST00000407768 123 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 MIR1287-201ENST00000408492 90 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 Z98949.2-201ENST00000440996 144 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 STAG3L5P-204ENST00000443759 179 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS52Q8N1B4 RNU4-71P-201ENST00000516258 113 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 RNU6-111P-201ENST00000517179 105 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS52Q8N1B4 MIR4762-201ENST00000585261 75 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 AC021506.2-201ENST00000612354 169 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 AL591926.4-201ENST00000616895 298 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.78□□□□□ -2.12
VPS52Q8N1B4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS52Q8N1B4 RNU6-379P-201ENST00000363813 104 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 RNU6-338P-201ENST00000383888 105 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 RNU7-95P-201ENST00000459222 64 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 COX6CP14-201ENST00000469580 174 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 HMGN1P7-201ENST00000491722 313 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 SNORD116-28-201ENST00000516123 91 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 AC100767.1-201ENST00000528178 123 ntBASIC1.77□□□□□ -2.13
VPS52Q8N1B4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS52Q8N1B4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
VPS52Q8N1B4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS52Q8N1B4 MIRLET7C-201ENST00000362160 84 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 RNY4P28-201ENST00000365281 93 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS52Q8N1B4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS52Q8N1B4 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 RNU7-34P-201ENST00000459394 64 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 MIR2681-201ENST00000581814 105 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 AL021707.8-201ENST00000609428 183 ntBASIC1.76□□□□□ -2.13
VPS52Q8N1B4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VPS52Q8N1B4 RNU6-653P-201ENST00000363074 106 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 RNY1P10-201ENST00000363268 113 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 RNU6-424P-201ENST00000384367 105 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS52Q8N1B4 RNU6-970P-201ENST00000516312 107 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 SNORA77B-201ENST00000578179 125 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.802-201ENST00000614892 130 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 AL365265.1-201ENST00000621045 234 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 AL513423.1-201ENST00000621695 132 ntBASIC1.75□□□□□ -2.13
VPS52Q8N1B4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.65-201ENST00000362846 100 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 RNU6-1209P-201ENST00000363655 107 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.293-201ENST00000364908 93 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 RNU6-203P-201ENST00000384038 104 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 MIR626-201ENST00000385032 94 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 MIR522-201ENST00000385071 87 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 MIR1278-201ENST00000408753 81 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 RN7SKP101-201ENST00000411376 320 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 RPL30P13-201ENST00000418873 348 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS52Q8N1B4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS52Q8N1B4 MIR4724-201ENST00000579485 89 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 AC009779.6-201ENST00000603972 165 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 AL645939.4-201ENST00000604495 135 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 AC141273.2-201ENST00000618989 130 ntBASIC1.74□□□□□ -2.13
VPS52Q8N1B4 MIR424-201ENST00000362227 98 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 SNORA8.3-201ENST00000384679 139 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VPS52Q8N1B4 RNA5SP496-201ENST00000391240 109 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms