Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX5Q8N196 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SIX5Q8N196 Y_RNA.309-201ENST00000365046 111 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SIX5Q8N196 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 RNA5SP508-201ENST00000411327 119 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 AC087499.4-201ENST00000448505 178 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 AC108938.1-201ENST00000451204 136 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX5Q8N196 AC114811.1-201ENST00000507207 168 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 RNU6-168P-201ENST00000516189 101 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 uc_338.28-201ENST00000612082 187 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 AC022513.1-201ENST00000624512 117 ntBASIC3.16□□□□□ -1.9
SIX5Q8N196 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX5Q8N196 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SIX5Q8N196 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SIX5Q8N196 AC062016.1-201ENST00000355719 319 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 Y_RNA.213-201ENST00000364178 111 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 RNU6-950P-201ENST00000384651 107 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 RNU11-3P-201ENST00000391111 133 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 RN7SKP200-201ENST00000410564 320 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 RNU7-80P-201ENST00000459562 61 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 MIR4778-201ENST00000577635 80 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.15□□□□□ -1.91
SIX5Q8N196 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.14□□□□□ -1.91
SIX5Q8N196 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIX5Q8N196 Y_RNA.43-201ENST00000362670 111 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 Y_RNA.281-201ENST00000364774 94 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 Y_RNA.351-201ENST00000365436 96 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 RNU6-32P-201ENST00000383948 107 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 RNY1P6-201ENST00000384193 109 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 Y_RNA.454-201ENST00000384224 113 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 RNU6-13P-201ENST00000384248 107 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 RNU6-12P-201ENST00000384604 107 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 RNU6-41P-201ENST00000384741 107 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 SNORD12C-201ENST00000386307 89 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SIX5Q8N196 RNA5SP89-201ENST00000410300 108 ntBASIC3.14□□□□□ -1.91
SIX5Q8N196 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.14□□□□□ -1.91
SIX5Q8N196 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SIX5Q8N196 MIR450A1-201ENST00000362262 91 ntBASIC3.13□□□□□ -1.91
SIX5Q8N196 RNU1-148P-201ENST00000384472 162 ntBASIC3.13□□□□□ -1.91
SIX5Q8N196 U8.17-201ENST00000391292 132 ntBASIC3.13□□□□□ -1.91
SIX5Q8N196 AL034345.1-201ENST00000407768 123 ntBASIC3.13□□□□□ -1.91
SIX5Q8N196 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX5Q8N196 CST9LP2-201ENST00000437612 320 ntBASIC3.13□□□□□ -1.91
SIX5Q8N196 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX5Q8N196 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX5Q8N196 AC021443.1-201ENST00000604478 211 ntBASIC3.13□□□□□ -1.91
SIX5Q8N196 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIX5Q8N196 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIX5Q8N196 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIX5Q8N196 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX5Q8N196 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SIX5Q8N196 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIX5Q8N196 RNU6-1298P-201ENST00000362456 101 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 RNU6-1107P-201ENST00000364817 104 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 Y_RNA.440-201ENST00000384120 114 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 RNU6-424P-201ENST00000384367 105 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 MIR597-201ENST00000384968 97 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 RNY4P20-201ENST00000516678 93 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 AC027279.3-201ENST00000625055 122 ntBASIC3.12□□□□□ -1.91
SIX5Q8N196 Y_RNA.198-201ENST00000364013 98 ntBASIC3.11□□□□□ -1.91
SIX5Q8N196 RPPH1-2P-201ENST00000516688 293 ntBASIC3.11□□□□□ -1.91
SIX5Q8N196 RNA5SP137-201ENST00000516833 135 ntBASIC3.11□□□□□ -1.91
SIX5Q8N196 RNU6-1116P-201ENST00000517269 99 ntBASIC3.11□□□□□ -1.91
SIX5Q8N196 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.11□□□□□ -1.91
SIX5Q8N196 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SIX5Q8N196 AL596211.1-201ENST00000569873 2277 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SIX5Q8N196 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 MIR342-201ENST00000362212 99 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 RNU6-349P-201ENST00000362402 107 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 Y_RNA.495-201ENST00000384435 112 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 AL627390.1-201ENST00000396055 340 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.1□□□□□ -1.91
SIX5Q8N196 SNX2P2-201ENST00000424553 323 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 AC021205.2-201ENST00000480069 347 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SIX5Q8N196 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SIX5Q8N196 AL589743.1-201ENST00000551932 2712 ntBASIC3.1□□□□□ -1.91
SIX5Q8N196 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SIX5Q8N196 Y_RNA.85-201ENST00000363014 111 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 SNORA25.6-201ENST00000364121 118 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 Y_RNA.241-201ENST00000364470 117 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 RNU6-938P-201ENST00000411285 103 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 RNA5SP492-201ENST00000411330 114 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX5Q8N196 RPS29P24-201ENST00000486345 171 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
SIX5Q8N196 RNU6-537P-201ENST00000517277 103 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms