Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 SNORD77B-201ENST00000391112 67 ntBASIC3.29□□□□□ -1.88
CCDC116Q8IYX3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 RNU6-424P-201ENST00000384367 105 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 MIR1262-201ENST00000408276 93 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 MIR1267-201ENST00000408723 78 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 Y_RNA.620-201ENST00000411009 88 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 AC003685.2-201ENST00000422795 395 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 RNU7-181P-201ENST00000517234 74 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 MIR4668-201ENST00000582284 70 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 AC009093.8-201ENST00000641769 292 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC116Q8IYX3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 AL021368.2-201ENST00000606125 5352 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 MIRLET7C-201ENST00000362160 84 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 SNORD115-2-201ENST00000362842 82 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 SNORD115-20-201ENST00000365099 82 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 RNU6-220P-201ENST00000390919 107 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 RNU2-40P-201ENST00000410833 196 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 AC015922.2-201ENST00000435593 184 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 SNORA70.19-201ENST00000516717 90 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 MIR548AE2-201ENST00000583456 67 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 MIR7851-201ENST00000610611 160 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 AC027279.3-201ENST00000625055 122 ntBASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC116Q8IYX3 AC096644.4-201ENST00000563417 2912 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AL442644.1-201ENST00000454390 3105 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNA5SP493-201ENST00000364115 91 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 Y_RNA.426-201ENST00000384068 113 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 Y_RNA.470-201ENST00000384307 117 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNU6-747P-201ENST00000390928 104 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNU6-241P-201ENST00000391148 104 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNU6-177P-201ENST00000411257 104 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 Z92545.1-201ENST00000411782 234 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 CYCSP4-201ENST00000429682 331 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AL133547.1-201ENST00000448546 220 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 MIR1270-201ENST00000459320 83 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AL049873.1-201ENST00000480540 376 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNA5SP33-201ENST00000516687 98 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 RNU6-56P-201ENST00000516986 93 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AC096720.1-201ENST00000604441 183 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 MIR8054-201ENST00000620877 86 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 AL512310.12-203ENST00000640543 90 ntBASIC3.26□□□□□ -1.89
CCDC116Q8IYX3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 SNORA73.2-201ENST00000364946 201 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 RNU6-24P-201ENST00000384440 107 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 MIR634-201ENST00000385208 97 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 UBL5P3-201ENST00000475112 231 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 AC005000.2-201ENST00000605468 310 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 AC103810.6-201ENST00000606708 136 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 SNORA28-201ENST00000606769 126 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 RNVU1-4-201ENST00000612985 164 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC116Q8IYX3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 RNU6-1313P-201ENST00000362622 102 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 SNORA22.1-201ENST00000362701 134 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 SNORD116-10-201ENST00000363791 102 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 RNY1P4-201ENST00000384595 115 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 SNORA26.7-201ENST00000391288 122 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 RN7SL601P-201ENST00000471221 293 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 AC019288.1-201ENST00000557918 224 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 MIR3169-201ENST00000578032 83 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 MIR3152-201ENST00000579801 74 ntBASIC3.24□□□□□ -1.89
CCDC116Q8IYX3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms