Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SNORA25.12-201ENST00000516202 82 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 MIR4287-201ENST00000579398 78 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 AC067747.1-201ENST00000608026 250 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 AC021506.2-201ENST00000612354 169 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 AC134878.1-201ENST00000619901 243 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 AC132825.6-201ENST00000638861 357 ntBASIC2.09□□□□□ -2.07
LYSMD2Q8IV50 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 MIR424-201ENST00000362227 98 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNU6-414P-201ENST00000363705 104 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 SNORD18B-201ENST00000365659 72 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 Y_RNA.410-201ENST00000383992 113 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 MIR548O-201ENST00000408583 114 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNA5SP341-201ENST00000516261 117 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNU6-406P-201ENST00000516470 107 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNU6-1270P-201ENST00000517128 108 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 MIR3910-1-201ENST00000580936 111 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 AL773524.1-201ENST00000614065 229 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 AC034229.5-201ENST00000624258 185 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 SNORD3E-202ENST00000627253 216 ntBASIC2.08□□□□□ -2.08
LYSMD2Q8IV50 RNU6-1123P-201ENST00000362347 106 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 MIR624-201ENST00000385217 97 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 MIR660-201ENST00000385235 97 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 SNORA40-201ENST00000388090 126 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 AC096725.1-201ENST00000514266 313 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 AC131055.1-201ENST00000584626 316 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 TUG1_4.1-201ENST00000619464 181 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 AC010332.2-201ENST00000613083 1904 ntBASIC2.07□□□□□ -2.08
LYSMD2Q8IV50 MIR7-3-201ENST00000384898 110 ntBASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 MTATP6P21-201ENST00000440681 189 ntBASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 AC087499.4-201ENST00000448505 178 ntBASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 RNU6-830P-201ENST00000516353 107 ntBASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 RNU6-1116P-201ENST00000517269 99 ntBASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 AC007751.1-201ENST00000529260 376 ntBASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
LYSMD2Q8IV50 SNORA71.3-201ENST00000362582 128 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 SNORD115-28-201ENST00000363931 81 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 RNU6-1082P-201ENST00000364574 107 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 SNRPGP14-201ENST00000435400 219 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 SNORA84-201ENST00000459229 133 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 RNU6-426P-201ENST00000516464 97 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 MIR3129-201ENST00000581095 76 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 AC008739.3-201ENST00000603262 127 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 AC012314.7-201ENST00000619693 93 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 MIR8057-201ENST00000620957 69 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 AP001340.1-201ENST00000624405 217 ntBASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LYSMD2Q8IV50 SNORD114-30-201ENST00000364448 72 ntBASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 Y_RNA.547-201ENST00000384654 119 ntBASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 MIR34B-201ENST00000385076 84 ntBASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 AC015922.2-201ENST00000435593 184 ntBASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 AP001328.1-201ENST00000528550 176 ntBASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 AC015726.2-201ENST00000620112 122 ntBASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
LYSMD2Q8IV50 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 RNU6-661P-201ENST00000362409 107 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 MIR539-201ENST00000365690 78 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 RNU6-1189P-201ENST00000383958 107 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 SNORA1-201ENST00000384107 130 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 SNORA44-201ENST00000384584 132 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 MIR518F-201ENST00000384973 87 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 MIR136-201ENST00000385207 82 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 AC092991.1-201ENST00000477176 376 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 RNU7-25P-201ENST00000516544 62 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 MIR4444-1-201ENST00000581696 74 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 MIR4444-2-201ENST00000584390 74 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 U2.22-201ENST00000636441 106 ntBASIC2.03□□□□□ -2.08
LYSMD2Q8IV50 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 Y_RNA.120-201ENST00000363304 110 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 Y_RNA.420-201ENST00000384043 110 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 MIR27B-201ENST00000385129 97 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 RN7SKP27-201ENST00000410684 333 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 RNU7-197P-201ENST00000458836 62 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 AC107297.1-201ENST00000459991 176 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 S100A11P2-201ENST00000467589 312 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 AC099513.1-201ENST00000490423 301 ntBASIC2.02□□□□□ -2.09
LYSMD2Q8IV50 Y_RNA.757-201ENST00000578934 114 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms