Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 SNORA1B-201ENST00000362535 133 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 SNORA1-201ENST00000384107 130 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 MIR512-1-201ENST00000384913 84 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 RNA5SP482-201ENST00000391269 118 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 MIR1263-201ENST00000408324 86 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 RNU2-7P-201ENST00000410794 178 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 AL513328.1-201ENST00000446460 224 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 AL031737.1-201ENST00000450125 223 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 AL021397.1-201ENST00000451806 248 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 AC096725.1-201ENST00000514266 313 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 RNU6-365P-201ENST00000517113 106 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 MIR3129-201ENST00000581095 76 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NPAS4Q8IUM7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 MIR126-201ENST00000362291 85 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 SNORA3A-201ENST00000364113 130 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 MIR802-201ENST00000390235 94 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 Y_RNA.694-201ENST00000516677 117 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 AC091544.4-201ENST00000555268 342 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 AL365205.2-201ENST00000594586 68 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 MIR6817-201ENST00000615588 66 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 MIR203B-201ENST00000636080 86 ntBASIC2.98□□□□□ -1.93
NPAS4Q8IUM7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNA5SP68-201ENST00000363885 119 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 SNORA67.1-201ENST00000364749 141 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNU6-32P-201ENST00000383948 107 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNU6-13P-201ENST00000384248 107 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNU6-12P-201ENST00000384604 107 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNU6-41P-201ENST00000384741 107 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 MIR520A-201ENST00000384862 85 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNY4P30-201ENST00000410216 95 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 AF228730.3-201ENST00000436691 102 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RN7SKP43-201ENST00000516173 320 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 AC245884.12-201ENST00000615364 59 ntBASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
NPAS4Q8IUM7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 RN7SKP200-201ENST00000410564 320 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 MTATP6P21-201ENST00000440681 189 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 RNU7-193P-201ENST00000516723 65 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 SNORA31.25-201ENST00000517242 134 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 RNU6-537P-201ENST00000517277 103 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 ZNF861P-201ENST00000588126 639 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 AC022217.4-201ENST00000604389 163 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS4Q8IUM7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 RNU6-106P-201ENST00000384405 107 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 RPS29P24-201ENST00000486345 171 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 MRPS17P9-201ENST00000511924 393 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 RNA5SP236-201ENST00000516169 116 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 Y_RNA.677-201ENST00000516401 85 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 RNU6-504P-201ENST00000516568 104 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 RNU6-1270P-201ENST00000517128 108 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 AC104984.5-201ENST00000586878 94 ntBASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS4Q8IUM7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 SNORD68-201ENST00000363214 84 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 Y_RNA.528-201ENST00000384575 108 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 SNORA12.1-201ENST00000390873 148 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 RNA5SP109-201ENST00000391010 116 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 RNA5SP148-201ENST00000516527 94 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 RNA5SP481-201ENST00000516814 122 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 AL591926.4-201ENST00000616895 298 ntBASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS4Q8IUM7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 RNU6-805P-201ENST00000365643 106 ntBASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 SNORD61-201ENST00000384252 73 ntBASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 RNA5SP501-201ENST00000410990 112 ntBASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 CALM2P4-201ENST00000430810 426 ntBASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.93□□□□□ -1.94
NPAS4Q8IUM7 AL590808.1-201ENST00000618696 141 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms