Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNU6-412P-201ENST00000516434 106 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 SNORA18.7-201ENST00000516910 131 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 MIR4513-201ENST00000581077 86 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.43-201ENST00000362670 111 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 MIR597-201ENST00000384968 97 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM50Q86XT4 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 SNORA31.26-201ENST00000517250 137 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 AP003484.1-201ENST00000530974 250 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 ZNF720P1-201ENST00000562403 1939 ntBASIC3.2□□□□□ -1.9
TRIM50Q86XT4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TRIM50Q86XT4 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 AC096644.4-201ENST00000563417 2912 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 RNU6-1019P-201ENST00000364424 107 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 RNU1-148P-201ENST00000384472 162 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 SNORD12C-201ENST00000386307 89 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 RNU6-938P-201ENST00000411285 103 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM50Q86XT4 MIR4298-201ENST00000584380 73 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 SNORA28-201ENST00000606769 126 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
TRIM50Q86XT4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM50Q86XT4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM50Q86XT4 MIR449A-201ENST00000362113 91 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.281-201ENST00000364774 94 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 RNU6-1107P-201ENST00000364817 104 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 RNU1-133P-201ENST00000364867 167 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 RNU11-3P-201ENST00000391111 133 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM50Q86XT4 SNORA31.10-201ENST00000516482 106 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM50Q86XT4 AC107016.2-201ENST00000547968 190 ntBASIC3.18□□□□□ -1.9
TRIM50Q86XT4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM50Q86XT4 RNU6-1255P-201ENST00000363434 112 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.309-201ENST00000365046 111 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 SNORD38C-201ENST00000384381 69 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.495-201ENST00000384435 112 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.549-201ENST00000384657 102 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 RNA5SP344-201ENST00000411081 104 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 HSPE1P9-201ENST00000440046 311 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 RNY4P20-201ENST00000516678 93 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 MIR3162-201ENST00000581818 82 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 AC021443.1-201ENST00000604478 211 ntBASIC3.17□□□□□ -1.9
TRIM50Q86XT4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM50Q86XT4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRIM50Q86XT4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM50Q86XT4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM50Q86XT4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM50Q86XT4 RNU6-349P-201ENST00000362402 107 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 Y_RNA.351-201ENST00000365436 96 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 RNU6-32P-201ENST00000383948 107 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 RNU6-13P-201ENST00000384248 107 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 RNU6-12P-201ENST00000384604 107 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 RNU6-41P-201ENST00000384741 107 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 U8.17-201ENST00000391292 132 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 AC002984.1-201ENST00000591692 448 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM50Q86XT4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM50Q86XT4 AL596211.1-201ENST00000569873 2277 ntBASIC3.16□□□□□ -1.9
TRIM50Q86XT4 MIR342-201ENST00000362212 99 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 RNU1-112P-201ENST00000364401 164 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 RNY1P6-201ENST00000384193 109 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 RNU6-106P-201ENST00000384405 107 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 RNU6-554P-201ENST00000410466 106 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 RNA5SP184-201ENST00000411071 108 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 AC087499.4-201ENST00000448505 178 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 SNORD109B-201ENST00000458961 67 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 SNORD109A-201ENST00000459128 67 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 RNU6-56P-201ENST00000516986 93 ntBASIC3.15□□□□□ -1.91
TRIM50Q86XT4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM50Q86XT4 MIRLET7C-201ENST00000362160 84 ntBASIC3.14□□□□□ -1.91
TRIM50Q86XT4 Y_RNA.85-201ENST00000363014 111 ntBASIC3.14□□□□□ -1.91
TRIM50Q86XT4 SNORD56.5-201ENST00000364281 72 ntBASIC3.14□□□□□ -1.91
TRIM50Q86XT4 SNX2P2-201ENST00000424553 323 ntBASIC3.14□□□□□ -1.91
TRIM50Q86XT4 AP006437.1-201ENST00000641440 3685 ntBASIC3.14□□□□□ -1.91
TRIM50Q86XT4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM50Q86XT4 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
TRIM50Q86XT4 SNORA63.5-201ENST00000363548 123 ntBASIC3.13□□□□□ -1.91
TRIM50Q86XT4 Y_RNA.198-201ENST00000364013 98 ntBASIC3.13□□□□□ -1.91
TRIM50Q86XT4 SNORA25.6-201ENST00000364121 118 ntBASIC3.13□□□□□ -1.91
TRIM50Q86XT4 Y_RNA.213-201ENST00000364178 111 ntBASIC3.13□□□□□ -1.91
TRIM50Q86XT4 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
TRIM50Q86XT4 AL138827.1-201ENST00000402666 306 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms