Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNU2-69P-201ENST00000516061 100 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 SCARNA4-201ENST00000629045 128 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 RNU4-55P-201ENST00000410731 137 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 RNU6-430P-201ENST00000517078 107 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 AL356055.1-201ENST00000602528 446 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 AL158050.2-201ENST00000605336 568 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 RNU6-855P-201ENST00000410395 104 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 MTATP6P18-201ENST00000417994 673 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 SUMO1P3-201ENST00000439961 304 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 AC022616.4-201ENST00000522985 181 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 MIR5591-201ENST00000578248 65 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 MIR6129-201ENST00000616087 109 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 AC127459.3-201ENST00000624328 466 ntBASIC-0.64□□□□□ -2.51
CSMD3Q7Z407 SNORD114-29-201ENST00000364819 70 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-407P-201ENST00000365280 104 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 SNORD116-12-201ENST00000384468 92 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-502P-201ENST00000362419 108 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-880P-201ENST00000384526 107 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 SNORD70.1-201ENST00000391007 85 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 MTND1P11-201ENST00000456661 876 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 FRG2DP-202ENST00000566967 323 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AC011458.1-201ENST00000604034 617 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 SNORA70.25-201ENST00000612741 95 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-433P-201ENST00000363216 104 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-179P-201ENST00000363350 107 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-509P-201ENST00000363519 107 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 RNU6-117P-201ENST00000365415 107 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AL008987.1-201ENST00000415528 237 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AL355994.1-201ENST00000424379 260 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 AL590491.3-201ENST00000610731 82 ntBASIC-0.65□□□□□ -2.51
CSMD3Q7Z407 GMFBP1-201ENST00000467831 427 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 AL137161.1-201ENST00000532231 390 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 UBL5P4-201ENST00000562584 236 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 MIR3179-1-201ENST00000578940 84 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 MIR3179-2-201ENST00000579107 84 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 MIR3179-3-201ENST00000579566 84 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 POLR3GP1-201ENST00000594073 261 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 MIR3179-4-201ENST00000617599 84 ntBASIC-0.66□□□□□ -2.51
CSMD3Q7Z407 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 AC236972.2-201ENST00000434979 310 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 AL512286.1-201ENST00000439244 400 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 RNU7-73P-201ENST00000458743 63 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 SNORD38B-201ENST00000384690 67 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 MIR516B1-201ENST00000385211 90 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 AL590002.1-201ENST00000406554 418 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 RNA5SP20-201ENST00000515976 84 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.66□□□□□ -2.52
CSMD3Q7Z407 MIR335-201ENST00000362173 94 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 RNU6-266P-201ENST00000364225 107 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 SNORD41.1-201ENST00000391000 69 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 MTCYBP36-201ENST00000404146 440 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 USMG5P1-201ENST00000425964 177 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 GPR143P-201ENST00000434155 205 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC112204.1-201ENST00000502591 103 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC022878.1-201ENST00000530684 149 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 MIR4752-201ENST00000579672 72 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AL133173.2-201ENST00000614270 90 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 SNORA72.3-201ENST00000365074 132 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 RNU7-181P-201ENST00000517234 74 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 MIR655-201ENST00000362159 97 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 SNORD50B-201ENST00000364995 70 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC134698.4-201ENST00000523451 826 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC072046.2-201ENST00000618366 268 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 AC009248.2-201ENST00000619826 254 ntBASIC-0.67□□□□□ -2.52
CSMD3Q7Z407 RNU6-410P-201ENST00000517006 107 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 MTND1P24-201ENST00000552175 861 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 MIR4491-201ENST00000581087 68 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms