Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-728P-201ENST00000365375 104 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 Y_RNA.357-201ENST00000365487 109 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 Y_RNA.398-201ENST00000383952 99 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-239P-201ENST00000390990 99 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 AL627390.1-201ENST00000396055 340 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 RNU2-55P-201ENST00000411146 174 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-561P-201ENST00000516222 102 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 MTND5P41-201ENST00000517498 206 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 MIR3133-201ENST00000583157 78 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.26□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.25□□□□□ -2.05
UBE3BQ7Z3V4 MIR15B-201ENST00000385045 98 ntBASIC2.25□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.25□□□□□ -2.05
UBE3BQ7Z3V4 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
UBE3BQ7Z3V4 MIR3935-201ENST00000583472 104 ntBASIC2.25□□□□□ -2.05
UBE3BQ7Z3V4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-774P-201ENST00000363238 107 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 SNORA16.1-201ENST00000364597 132 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 AL121914.1-201ENST00000450188 156 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 RPS27P1-201ENST00000450552 247 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 AC107027.2-201ENST00000512197 115 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 AP002004.2-201ENST00000531656 154 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 RPL23AP91-201ENST00000569211 455 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 AC022217.4-201ENST00000604389 163 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 uc_338.4-201ENST00000616635 176 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 MTND1P7-201ENST00000632801 297 ntBASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
UBE3BQ7Z3V4 SNORD45.3-201ENST00000363836 72 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-1130P-201ENST00000365434 107 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-643P-201ENST00000384018 107 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 MIR597-201ENST00000384968 97 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 RNU11-3P-201ENST00000391111 133 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 RNU4-61P-201ENST00000411243 107 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 AL603825.1-201ENST00000438481 80 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 SNRPGP8-201ENST00000454064 226 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 HMGN1P7-201ENST00000491722 313 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 SNORD77.4-201ENST00000516158 81 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 AL160236.1-201ENST00000556317 195 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 MIR4529-201ENST00000578110 78 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 AC069114.2-201ENST00000604699 304 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
UBE3BQ7Z3V4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 SNORA1B-201ENST00000362535 133 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-449P-201ENST00000383914 107 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 RNU6-484P-201ENST00000384016 107 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 SNORA17.3-201ENST00000391159 129 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 AC245047.4-201ENST00000433189 144 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 AC233266.1-201ENST00000454518 96 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 SNORD13-201ENST00000459299 104 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 SNORA25.15-201ENST00000516487 89 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 AC078899.2-201ENST00000595282 212 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 AL049861.1-201ENST00000603130 150 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 AC242852.1-201ENST00000612151 96 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 JPX_2.1-201ENST00000614161 69 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 AC244015.1-201ENST00000622301 99 ntBASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
UBE3BQ7Z3V4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 RNA5SP190-201ENST00000365222 118 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 SNORD116-18-201ENST00000383961 92 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 SNORA48.1-201ENST00000390879 135 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 AL606517.2-201ENST00000442855 241 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 AC023449.1-201ENST00000454464 154 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 AC084364.2-201ENST00000546924 395 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 MIR3683-201ENST00000580847 82 ntBASIC2.21□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 SNORD50.2-201ENST00000365465 70 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-187P-201ENST00000384139 106 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 SUMO2P12-201ENST00000405924 140 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 AC069257.2-201ENST00000441819 155 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 AL049830.1-201ENST00000468034 425 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 AC097639.2-201ENST00000603159 172 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
UBE3BQ7Z3V4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms