Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SHFQ7M4L6 RNU6-131P-201ENST00000391144 107 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 RNA5SP496-201ENST00000391240 109 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 AL445685.2-201ENST00000422551 342 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 PGBD4P5-201ENST00000445958 426 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 AC245047.8-201ENST00000456455 284 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 RNA5SP182-201ENST00000516064 82 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 RNU6-453P-201ENST00000516819 85 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 RNU6-794P-201ENST00000517261 64 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.6□□□□□ -2.15
SHFQ7M4L6 AL049861.1-201ENST00000603130 150 ntBASIC1.6□□□□□ -2.15
SHFQ7M4L6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
SHFQ7M4L6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SHFQ7M4L6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SHFQ7M4L6 Y_RNA.297-201ENST00000364950 91 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 SNORD50B-201ENST00000364995 70 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 RNU6-47P-201ENST00000383866 107 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 MT-TT-201ENST00000387460 66 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SHFQ7M4L6 AC108059.2-201ENST00000434626 151 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.59□□□□□ -2.15
SHFQ7M4L6 SNORA77B-201ENST00000578179 125 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 AC120024.3-201ENST00000603167 156 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 AL513423.1-201ENST00000621695 132 ntBASIC1.59□□□□□ -2.15
SHFQ7M4L6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
SHFQ7M4L6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SHFQ7M4L6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SHFQ7M4L6 MIR424-201ENST00000362227 98 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 MIR616-201ENST00000385293 97 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 RNU6-918P-201ENST00000391219 106 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 PIGPP3-201ENST00000425307 415 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.58□□□□□ -2.16
SHFQ7M4L6 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.58□□□□□ -2.16
SHFQ7M4L6 RN7SKP164-201ENST00000516138 266 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 MIR4648-201ENST00000580107 72 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 Z83818.1-201ENST00000603584 150 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
SHFQ7M4L6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
SHFQ7M4L6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SHFQ7M4L6 MIR660-201ENST00000385235 97 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 RPL30P13-201ENST00000418873 348 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 CYCTP-201ENST00000504253 315 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 AC114811.1-201ENST00000507207 168 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.57□□□□□ -2.16
SHFQ7M4L6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 AC008507.4-201ENST00000585464 127 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 RNU2-4P-201ENST00000606190 192 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 AL391903.3-201ENST00000612158 163 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 uc_338.4-201ENST00000616635 176 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 MIR6852-201ENST00000621699 66 ntBASIC1.57□□□□□ -2.16
SHFQ7M4L6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
SHFQ7M4L6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 RNU6-163P-201ENST00000384396 106 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 SNORD72-201ENST00000390994 80 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 AL606845.1-201ENST00000404881 255 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 AC093850.1-201ENST00000454121 251 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 Y_RNA.644-201ENST00000459006 113 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 RNU7-12P-201ENST00000516030 62 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 SNORD77.4-201ENST00000516158 81 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 Y_RNA.674-201ENST00000516362 113 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 SNORD45.4-201ENST00000516629 73 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.56□□□□□ -2.16
SHFQ7M4L6 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 AC087685.1-201ENST00000587507 141 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 AC027279.3-201ENST00000625055 122 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
SHFQ7M4L6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
SHFQ7M4L6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 RNU6-833P-201ENST00000363486 107 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 RNU6-1020P-201ENST00000363684 107 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 Y_RNA.571-201ENST00000384753 98 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 RNU7-149P-201ENST00000516739 59 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 SUMO2P16-201ENST00000519475 264 ntBASIC1.55□□□□□ -2.16
SHFQ7M4L6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.55□□□□□ -2.16
SHFQ7M4L6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHFQ7M4L6 U8.2-201ENST00000363156 134 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 RNU6-103P-201ENST00000363686 107 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 AL138752.1-201ENST00000452964 351 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 AC023449.1-201ENST00000454464 154 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 AC022559.1-201ENST00000520905 205 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 AC015688.6-201ENST00000577737 104 ntBASIC1.54□□□□□ -2.16
SHFQ7M4L6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.53□□□□□ -2.16
SHFQ7M4L6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 290.3 ms