Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR570-201ENST00000384917 97 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 MIR548A2-201ENST00000384956 97 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 SNORD72-201ENST00000390994 80 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 RNU2-32P-201ENST00000411193 191 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 SCARNA15-202ENST00000516881 127 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 MIR376A2-201ENST00000636782 80 ntBASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CNKSR3Q6P9H4 MIR340-201ENST00000362125 95 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-888P-201ENST00000363010 101 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.163-201ENST00000363702 113 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 SNORA51.10-201ENST00000384418 136 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 SNORA12.1-201ENST00000390873 148 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 SNORD77.3-201ENST00000391113 65 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 RNA5SP136-201ENST00000410906 107 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 AC007064.1-201ENST00000412238 351 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 snoU13.23-201ENST00000458863 104 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 RNA5SP490-201ENST00000517141 136 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 AL591926.4-201ENST00000616895 298 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 AL035470.1-201ENST00000622571 220 ntBASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
CNKSR3Q6P9H4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 RNU1-96P-201ENST00000364163 162 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-294P-201ENST00000364999 102 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.388-201ENST00000383919 113 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-546P-201ENST00000383991 107 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-49P-201ENST00000384256 107 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 MIR1273D-201ENST00000577266 86 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 AC073413.2-201ENST00000604332 360 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 AL137067.1-201ENST00000615933 120 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 U4atac.1-201ENST00000618345 95 ntBASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CNKSR3Q6P9H4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 SNORA51.5-201ENST00000384126 131 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 AL590004.2-201ENST00000404787 371 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 AC060773.1-201ENST00000421698 310 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 COX6CP6-201ENST00000490840 228 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 HMGN1P7-201ENST00000491722 313 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-113P-201ENST00000516653 101 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 RNU7-128P-201ENST00000517247 62 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 AC008507.4-201ENST00000585464 127 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
CNKSR3Q6P9H4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 SNORD24-201ENST00000383884 75 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-1014P-201ENST00000383940 103 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-443P-201ENST00000384780 107 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 MIR520G-201ENST00000385064 90 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNY4P29-201ENST00000410801 97 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 SNRPGP10-201ENST00000432323 225 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 AC093259.1-201ENST00000509755 300 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-693P-201ENST00000516134 107 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-856P-201ENST00000516959 98 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-762P-201ENST00000517107 102 ntBASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CNKSR3Q6P9H4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 RNU1-23P-201ENST00000363361 144 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 AL117342.1-201ENST00000404861 406 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 AC244505.4-201ENST00000434905 287 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 AC009238.1-201ENST00000442165 424 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 SSXP5-201ENST00000443473 287 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 AC009237.6-201ENST00000446969 424 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 DEFB122-202ENST00000569013 197 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 AC103810.6-201ENST00000606708 136 ntBASIC2.67□□□□□ -1.98
CNKSR3Q6P9H4 SNORA63.5-201ENST00000363548 123 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 RNA5SP456-201ENST00000364002 114 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 Y_RNA.323-201ENST00000365157 109 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 MIR488-201ENST00000365739 83 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 MIR518F-201ENST00000384973 87 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 MIR1302-5-201ENST00000408164 150 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 MIR1253-201ENST00000408273 105 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 RNU2-48P-201ENST00000410694 191 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 HMGN2P35-201ENST00000412164 270 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 AC123900.1-201ENST00000420390 96 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms