Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.98
CDPF1Q6NVV7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CDPF1Q6NVV7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CDPF1Q6NVV7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CDPF1Q6NVV7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 MIR627-201ENST00000384979 97 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 MIR605-201ENST00000385078 83 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNU6-1319P-201ENST00000390855 104 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNU6-747P-201ENST00000390928 104 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNA5SP171-201ENST00000391071 115 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNU6-241P-201ENST00000391148 104 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNU6-644P-201ENST00000391155 98 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNU6-177P-201ENST00000411257 104 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 Z92545.1-201ENST00000411782 234 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 AL135938.1-201ENST00000443141 297 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RN7SL594P-201ENST00000470590 287 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 RNU6-795P-201ENST00000516323 103 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 AL513534.2-201ENST00000603836 250 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 U7.3-201ENST00000616123 62 ntBASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDPF1Q6NVV7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 AC007336.1-201ENST00000576365 3828 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 Y_RNA.96-201ENST00000363092 109 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 SNORD56.5-201ENST00000364281 72 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 SNORA18-201ENST00000384416 132 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 MIR29C-201ENST00000385231 88 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 AL451046.2-201ENST00000403074 277 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 RNU7-113P-201ENST00000459273 62 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 snoU13.22-201ENST00000459428 104 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 UBL5P3-201ENST00000475112 231 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 RNA5SP164-201ENST00000516533 110 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 RNU7-181P-201ENST00000517234 74 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 MIR3152-201ENST00000579801 74 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 AC069114.2-201ENST00000604699 304 ntBASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDPF1Q6NVV7 RNU1-58P-201ENST00000362413 163 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 SNORA1.2-201ENST00000365189 134 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 Y_RNA.377-201ENST00000365644 108 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 AL445687.1-201ENST00000439946 251 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 AL353813.1-201ENST00000440700 253 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 AC069257.2-201ENST00000441819 155 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 RNU6-1018P-201ENST00000516577 106 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 AC022254.1-201ENST00000567857 235 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 AC025521.1-201ENST00000621624 286 ntBASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.63□□□□□ -1.99
CDPF1Q6NVV7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 SNORD46.1-201ENST00000364139 104 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 RNY1P1-201ENST00000364372 112 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 SNORD45B-201ENST00000364617 72 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 RNU6-679P-201ENST00000391003 106 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 U8.16-201ENST00000391279 133 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 AL034345.1-201ENST00000407768 123 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 MRPL35P3-201ENST00000421557 364 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 RNU6-1258P-201ENST00000516911 111 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 IGLL4P-201ENST00000614590 133 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.62□□□□□ -1.99
CDPF1Q6NVV7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 RNU6-60P-201ENST00000364792 103 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 SNORA70.7-201ENST00000384159 133 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 RNU6-950P-201ENST00000384651 107 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 SNORA11.1-201ENST00000408133 129 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 SNORA3.3-201ENST00000408712 125 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 RNU7-45P-201ENST00000459460 63 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 AC022137.1-201ENST00000483735 151 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 RPL23AP63-201ENST00000498752 471 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 RNU6-162P-201ENST00000516228 103 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 AC026333.2-201ENST00000542164 106 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 MIR4777-201ENST00000583710 86 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 MIR6868-201ENST00000611215 58 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 MIR3202-2-201ENST00000635980 79 ntBASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDPF1Q6NVV7 AC073346.2-201ENST00000624724 2058 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms