Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 RNU6-653P-201ENST00000363074 106 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 RNU6-379P-201ENST00000363813 104 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 SNORD14E-201ENST00000364009 85 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 RNA5SP425-201ENST00000410336 112 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF220Q5VTB9 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 uc_338.4-201ENST00000616635 176 ntBASIC1.84□□□□□ -2.11
RNF220Q5VTB9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RNF220Q5VTB9 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 MIR802-201ENST00000390235 94 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 RN7SKP51-201ENST00000410781 304 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.83□□□□□ -2.12
RNF220Q5VTB9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RNF220Q5VTB9 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 AC008507.4-201ENST00000585464 127 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.83□□□□□ -2.12
RNF220Q5VTB9 RNU6-457P-201ENST00000363999 107 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 RNA5SP126-201ENST00000365092 109 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 RNU4-17P-201ENST00000365598 141 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 SNORA3.2-201ENST00000408221 125 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.82□□□□□ -2.12
RNF220Q5VTB9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.82□□□□□ -2.12
RNF220Q5VTB9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.82□□□□□ -2.12
RNF220Q5VTB9 AL049861.1-201ENST00000603130 150 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 AC141273.2-201ENST00000618989 130 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 AC106754.2-201ENST00000623006 233 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 AC064859.1-201ENST00000624741 174 ntBASIC1.82□□□□□ -2.12
RNF220Q5VTB9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RNF220Q5VTB9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.199-201ENST00000364014 102 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 RNU6-442P-201ENST00000383968 104 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.552-201ENST00000384665 112 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 MIR452-201ENST00000385020 85 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 MIR1298-201ENST00000408783 112 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 Z98742.3-201ENST00000418637 326 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
RNF220Q5VTB9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
RNF220Q5VTB9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RNF220Q5VTB9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.200-201ENST00000364018 102 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 SNORA2.2-201ENST00000365473 135 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 RNY3P5-201ENST00000384127 102 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 Y_RNA.515-201ENST00000384535 112 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 MIR616-201ENST00000385293 97 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 RN7SKP164-201ENST00000516138 266 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 RNU7-149P-201ENST00000516739 59 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 AC009779.6-201ENST00000603972 165 ntBASIC1.8□□□□□ -2.12
RNF220Q5VTB9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RNF220Q5VTB9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RNF220Q5VTB9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RNF220Q5VTB9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 SNX2P2-201ENST00000424553 323 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 AC027119.1-201ENST00000440877 241 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 RNY3P16-201ENST00000516338 101 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 RNU6-388P-201ENST00000517012 105 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 RNU6-389P-201ENST00000517048 105 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 AL365434.2-201ENST00000607979 234 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 AL391903.3-201ENST00000612158 163 ntBASIC1.79□□□□□ -2.12
RNF220Q5VTB9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RNF220Q5VTB9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 MIR653-201ENST00000385279 96 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 SNORD72-201ENST00000390994 80 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RNU6-1228P-201ENST00000391014 107 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RNU6-381P-201ENST00000391259 108 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 AC245517.4-201ENST00000448601 281 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 AC245047.8-201ENST00000456455 284 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RN7SL429P-201ENST00000479090 223 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RN7SL489P-201ENST00000486185 223 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RN7SL327P-201ENST00000488659 223 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RNU6-322P-201ENST00000516010 103 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 SNORD77.4-201ENST00000516158 81 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 AC090049.2-201ENST00000550377 109 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 MIR4662B-201ENST00000579498 81 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 Pinc.1-201ENST00000616452 154 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 RN7SL853P-201ENST00000617250 223 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.78□□□□□ -2.12
RNF220Q5VTB9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RNF220Q5VTB9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms