Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNORA31.4-201ENST00000516049 129 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 RNU7-128P-201ENST00000517247 62 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 AC140658.3-201ENST00000567603 271 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 MIR6079-201ENST00000635807 62 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 MIR622-201ENST00000638396 96 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 AL353746.1-201ENST00000566293 6881 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 AC005336.3-201ENST00000623833 2679 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 HMGN2P34-201ENST00000437647 269 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 AC069257.2-201ENST00000441819 155 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 RNU7-113P-201ENST00000459273 62 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 RNU7-23P-201ENST00000459465 62 ntBASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RSPO4Q2I0M5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AF117829.1-206ENST00000621883 3802 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 RNU6-1163P-201ENST00000364516 107 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 Z98742.2-201ENST00000431564 187 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 HMGN2P18-201ENST00000450680 270 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 snoU13.23-201ENST00000458863 104 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AL049830.1-201ENST00000468034 425 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 RNA5SP24-201ENST00000516478 95 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AC079600.2-201ENST00000550076 130 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AC022149.2-201ENST00000621061 203 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 AC244205.2-202ENST00000635781 342 ntBASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RSPO4Q2I0M5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
RSPO4Q2I0M5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 MIR30E-201ENST00000362104 92 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 RNU6-1084P-201ENST00000362498 107 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.171-201ENST00000363760 102 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 SNORD115-37-201ENST00000363768 82 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.247-201ENST00000364500 92 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 AL603825.1-201ENST00000438481 80 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 MIR1270-201ENST00000459320 83 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 RNU6-998P-201ENST00000515894 101 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 SNORA4.4-201ENST00000515921 135 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 MIR2276-201ENST00000516886 89 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 RNU6-856P-201ENST00000516959 98 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 SCARNA3-201ENST00000517097 143 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 uc_338.1-201ENST00000612113 180 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.788-201ENST00000622394 112 ntBASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RSPO4Q2I0M5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 MIR22-201ENST00000362190 85 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 SNORA1B-201ENST00000362535 133 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 SNORD115-2-201ENST00000362842 82 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 SNORD68-201ENST00000363214 84 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 snoU2-30.1-201ENST00000365012 70 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 SNORD115-20-201ENST00000365099 82 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 RNU6-198P-201ENST00000384258 104 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 RNU6-987P-201ENST00000384759 104 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 RPL31P63-201ENST00000422565 375 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 AL513328.1-201ENST00000446460 224 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 RNU6-1258P-201ENST00000516911 111 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 MIR548AE2-201ENST00000583456 67 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 MIR4762-201ENST00000585261 75 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 AC092881.1-201ENST00000638218 2733 ntBASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.01□□□□□ -1.93
RSPO4Q2I0M5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
RSPO4Q2I0M5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RSPO4Q2I0M5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
RSPO4Q2I0M5 ICE2P2-201ENST00000483823 2787 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 RNU6-1094P-201ENST00000362416 104 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.140-201ENST00000363474 103 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 SNORA27-201ENST00000384323 126 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 MIR1265-201ENST00000408444 86 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC060773.1-201ENST00000421698 310 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC006989.1-201ENST00000427212 131 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC244505.4-201ENST00000434905 287 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 SSXP5-201ENST00000443473 287 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms