Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX1-1Q15270 RNU4-69P-201ENST00000410677 143 ntBASIC4.13□□□□□ -1.75
NKX1-1Q15270 RNU7-53P-201ENST00000516705 60 ntBASIC4.13□□□□□ -1.75
NKX1-1Q15270 MIR3618-201ENST00000580330 88 ntBASIC4.13□□□□□ -1.75
NKX1-1Q15270 HSPE1P19-201ENST00000603327 295 ntBASIC4.13□□□□□ -1.75
NKX1-1Q15270 AC006023.1-201ENST00000603944 259 ntBASIC4.13□□□□□ -1.75
NKX1-1Q15270 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX1-1Q15270 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX1-1Q15270 AC108206.1-201ENST00000570186 4159 ntBASIC4.12□□□□□ -1.75
NKX1-1Q15270 MIRLET7C-201ENST00000362160 84 ntBASIC4.12□□□□□ -1.75
NKX1-1Q15270 SNORA18-201ENST00000384416 132 ntBASIC4.12□□□□□ -1.75
NKX1-1Q15270 AL139132.1-201ENST00000431587 344 ntBASIC4.12□□□□□ -1.75
NKX1-1Q15270 RNU2-11P-201ENST00000459191 187 ntBASIC4.12□□□□□ -1.75
NKX1-1Q15270 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX1-1Q15270 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX1-1Q15270 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX1-1Q15270 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX1-1Q15270 AL442644.1-201ENST00000454390 3105 ntBASIC4.12□□□□□ -1.75
NKX1-1Q15270 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
NKX1-1Q15270 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NKX1-1Q15270 RNU4-67P-201ENST00000364569 141 ntBASIC4.11□□□□□ -1.75
NKX1-1Q15270 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX1-1Q15270 MIR452-201ENST00000385020 85 ntBASIC4.11□□□□□ -1.75
NKX1-1Q15270 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX1-1Q15270 RNU7-113P-201ENST00000459273 62 ntBASIC4.11□□□□□ -1.75
NKX1-1Q15270 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX1-1Q15270 MIR2276-201ENST00000516886 89 ntBASIC4.11□□□□□ -1.75
NKX1-1Q15270 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.11□□□□□ -1.75
NKX1-1Q15270 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX1-1Q15270 RNU6-832P-201ENST00000363319 107 ntBASIC4.1□□□□□ -1.75
NKX1-1Q15270 RNU6-1152P-201ENST00000384576 107 ntBASIC4.1□□□□□ -1.75
NKX1-1Q15270 MIR627-201ENST00000384979 97 ntBASIC4.1□□□□□ -1.75
NKX1-1Q15270 AL512326.2-201ENST00000426359 151 ntBASIC4.1□□□□□ -1.75
NKX1-1Q15270 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX1-1Q15270 AC096644.4-201ENST00000563417 2912 ntBASIC4.1□□□□□ -1.75
NKX1-1Q15270 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX1-1Q15270 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX1-1Q15270 Y_RNA.219-201ENST00000364232 113 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 SNORA71.1-201ENST00000364523 117 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 Y_RNA.360-201ENST00000365512 102 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 RNU6-1319P-201ENST00000390855 104 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 RNU6-747P-201ENST00000390928 104 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 RNU6-1275P-201ENST00000391087 107 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 RNU6-241P-201ENST00000391148 104 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 RNU6-177P-201ENST00000411257 104 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 RNU6-1116P-201ENST00000517269 99 ntBASIC4.09□□□□□ -1.75
NKX1-1Q15270 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX1-1Q15270 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NKX1-1Q15270 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.09□□□□□ -1.76
NKX1-1Q15270 SNORD115-3-201ENST00000363100 82 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 SNORA5B-201ENST00000363786 132 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 SNORD45B-201ENST00000364617 72 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 AC004941.2-201ENST00000427009 228 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 MIR3126-201ENST00000577443 74 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 MIR3162-201ENST00000581818 82 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 AC064859.1-201ENST00000624741 174 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX1-1Q15270 MIR1245B-201ENST00000636115 69 ntBASIC4.08□□□□□ -1.76
NKX1-1Q15270 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NKX1-1Q15270 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX1-1Q15270 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX1-1Q15270 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NKX1-1Q15270 SNORD115-2-201ENST00000362842 82 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 SNORD115-20-201ENST00000365099 82 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 SNORD15B-201ENST00000384714 146 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX1-1Q15270 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX1-1Q15270 AL135938.1-201ENST00000443141 297 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX1-1Q15270 NDUFB9P3-201ENST00000521269 501 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 DNAJC19P9-201ENST00000555084 351 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 AC093908.1-201ENST00000623125 8092 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 AC092881.1-201ENST00000638218 2733 ntBASIC4.07□□□□□ -1.76
NKX1-1Q15270 POLR2J4-204ENST00000418424 324 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 RN7SL429P-201ENST00000479090 223 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 RN7SL489P-201ENST00000486185 223 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 AC006483.1-201ENST00000487308 313 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 RN7SL327P-201ENST00000488659 223 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 RNA5SP356-201ENST00000515972 94 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 RNU7-12P-201ENST00000516030 62 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 RN7SL853P-201ENST00000617250 223 ntBASIC4.06□□□□□ -1.76
NKX1-1Q15270 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX1-1Q15270 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
NKX1-1Q15270 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX1-1Q15270 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NKX1-1Q15270 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX1-1Q15270 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX1-1Q15270 Y_RNA.370-201ENST00000365589 108 ntBASIC4.05□□□□□ -1.76
NKX1-1Q15270 MIR136-201ENST00000385207 82 ntBASIC4.05□□□□□ -1.76
NKX1-1Q15270 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX1-1Q15270 AC109327.2-201ENST00000448339 378 ntBASIC4.05□□□□□ -1.76
NKX1-1Q15270 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX1-1Q15270 RNU6-1018P-201ENST00000516577 106 ntBASIC4.05□□□□□ -1.76
NKX1-1Q15270 RNU7-181P-201ENST00000517234 74 ntBASIC4.05□□□□□ -1.76
NKX1-1Q15270 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX1-1Q15270 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX1-1Q15270 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX1-1Q15270 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NKX1-1Q15270 MIR494-201ENST00000349529 81 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms