Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
LTBQ06643 RNU6-1209P-201ENST00000363655 107 ntBASIC1.87□□□□□ -2.11
LTBQ06643 SNORD45.3-201ENST00000363836 72 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNA5SP493-201ENST00000364115 91 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNU6-1164P-201ENST00000364428 107 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNU6-728P-201ENST00000365375 104 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNY3P5-201ENST00000384127 102 ntBASIC1.87□□□□□ -2.11
LTBQ06643 Y_RNA.497-201ENST00000384447 98 ntBASIC1.87□□□□□ -2.11
LTBQ06643 MIR569-201ENST00000385228 96 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNA5SP496-201ENST00000391240 109 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNU1-131P-201ENST00000458943 161 ntBASIC1.87□□□□□ -2.11
LTBQ06643 RNU6-426P-201ENST00000516464 97 ntBASIC1.87□□□□□ -2.11
LTBQ06643 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.87□□□□□ -2.11
LTBQ06643 AC091178.2-201ENST00000584401 117 ntBASIC1.87□□□□□ -2.11
LTBQ06643 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
LTBQ06643 DNAJC19P2-201ENST00000593340 302 ntBASIC1.87□□□□□ -2.11
LTBQ06643 AP001485.1-201ENST00000604799 199 ntBASIC1.87□□□□□ -2.11
LTBQ06643 SNORD115-3-201ENST00000363100 82 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RNU4-11P-201ENST00000365287 132 ntBASIC1.86□□□□□ -2.11
LTBQ06643 Y_RNA.337-201ENST00000365312 102 ntBASIC1.86□□□□□ -2.11
LTBQ06643 SNORD113-1-201ENST00000365321 69 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RNU6-81P-201ENST00000365608 104 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RNU6-1080P-201ENST00000383982 107 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
LTBQ06643 MIR583-201ENST00000384846 75 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RNU4-43P-201ENST00000410628 137 ntBASIC1.86□□□□□ -2.11
LTBQ06643 TRMT112P2-201ENST00000512910 132 ntBASIC1.86□□□□□ -2.11
LTBQ06643 RPL23AP91-201ENST00000569211 455 ntBASIC1.86□□□□□ -2.11
LTBQ06643 MIR3169-201ENST00000578032 83 ntBASIC1.86□□□□□ -2.11
LTBQ06643 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
LTBQ06643 AL353149.1-201ENST00000610667 244 ntBASIC1.86□□□□□ -2.11
LTBQ06643 AL359075.3-201ENST00000613288 217 ntBASIC1.86□□□□□ -2.11
LTBQ06643 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
LTBQ06643 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.86□□□□□ -2.11
LTBQ06643 AC100821.1-201ENST00000523153 2479 ntBASIC1.86□□□□□ -2.11
LTBQ06643 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LTBQ06643 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
LTBQ06643 Y_RNA.343-201ENST00000365354 112 ntBASIC1.85□□□□□ -2.11
LTBQ06643 RNU6-768P-201ENST00000384683 107 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AL512604.1-201ENST00000404812 257 ntBASIC1.85□□□□□ -2.11
LTBQ06643 RNA5SP270-201ENST00000411361 118 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
LTBQ06643 ATP5J2P3-201ENST00000451550 258 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AC233266.1-201ENST00000454518 96 ntBASIC1.85□□□□□ -2.11
LTBQ06643 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
LTBQ06643 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
LTBQ06643 MIR3126-201ENST00000577443 74 ntBASIC1.85□□□□□ -2.11
LTBQ06643 MIR548X2-201ENST00000579776 100 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AC242852.1-201ENST00000612151 96 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AC244015.1-201ENST00000622301 99 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AC022513.1-201ENST00000624512 117 ntBASIC1.85□□□□□ -2.11
LTBQ06643 AC245060.5-201ENST00000610778 3293 ntBASIC1.85□□□□□ -2.11
LTBQ06643 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
LTBQ06643 RNY1P11-201ENST00000363759 113 ntBASIC1.84□□□□□ -2.11
LTBQ06643 Y_RNA.224-201ENST00000364308 111 ntBASIC1.84□□□□□ -2.11
LTBQ06643 RNU6-484P-201ENST00000384016 107 ntBASIC1.84□□□□□ -2.11
LTBQ06643 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.11
LTBQ06643 SNORA20-201ENST00000384662 132 ntBASIC1.84□□□□□ -2.11
LTBQ06643 Y_RNA.621-201ENST00000411065 96 ntBASIC1.84□□□□□ -2.11
LTBQ06643 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.84□□□□□ -2.11
LTBQ06643 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.84□□□□□ -2.11
LTBQ06643 SNORD11-201ENST00000459124 84 ntBASIC1.84□□□□□ -2.11
LTBQ06643 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
LTBQ06643 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
LTBQ06643 SNORA25.12-201ENST00000516202 82 ntBASIC1.84□□□□□ -2.11
LTBQ06643 RNU1-142P-201ENST00000516682 145 ntBASIC1.84□□□□□ -2.11
LTBQ06643 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
LTBQ06643 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
LTBQ06643 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
LTBQ06643 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
LTBQ06643 AC078899.2-201ENST00000595282 212 ntBASIC1.84□□□□□ -2.11
LTBQ06643 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
LTBQ06643 uc_338.4-201ENST00000616635 176 ntBASIC1.84□□□□□ -2.11
LTBQ06643 MIR6079-201ENST00000635807 62 ntBASIC1.84□□□□□ -2.11
LTBQ06643 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
LTBQ06643 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LTBQ06643 AL596028.1-201ENST00000326971 197 ntBASIC1.83□□□□□ -2.12
LTBQ06643 MIR520G-201ENST00000385064 90 ntBASIC1.83□□□□□ -2.12
LTBQ06643 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LTBQ06643 Y_RNA.586-201ENST00000391146 98 ntBASIC1.83□□□□□ -2.12
LTBQ06643 MIR548I2-201ENST00000408348 149 ntBASIC1.83□□□□□ -2.12
LTBQ06643 RNU6-257P-201ENST00000410238 98 ntBASIC1.83□□□□□ -2.12
LTBQ06643 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.83□□□□□ -2.12
LTBQ06643 MIR2681-201ENST00000581814 105 ntBASIC1.83□□□□□ -2.12
LTBQ06643 AL359821.1-201ENST00000605519 182 ntBASIC1.83□□□□□ -2.12
LTBQ06643 AC018630.2-201ENST00000534866 2403 ntBASIC1.82□□□□□ -2.12
LTBQ06643 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
LTBQ06643 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
LTBQ06643 RNU6-1336P-201ENST00000383886 109 ntBASIC1.82□□□□□ -2.12
LTBQ06643 Y_RNA.393-201ENST00000383936 102 ntBASIC1.82□□□□□ -2.12
LTBQ06643 Y_RNA.521-201ENST00000384560 114 ntBASIC1.82□□□□□ -2.12
LTBQ06643 SNORA8-201ENST00000384574 139 ntBASIC1.82□□□□□ -2.12
LTBQ06643 MIR562-201ENST00000384894 95 ntBASIC1.82□□□□□ -2.12
LTBQ06643 SNORA17.3-201ENST00000391159 129 ntBASIC1.82□□□□□ -2.12
LTBQ06643 AC019129.1-201ENST00000403786 261 ntBASIC1.82□□□□□ -2.12
LTBQ06643 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
LTBQ06643 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
LTBQ06643 RNU7-197P-201ENST00000458836 62 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms