Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AC063944.3-201ENST00000609969 533 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 U6.42-201ENST00000618440 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR335-201ENST00000362173 94 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU4-21P-201ENST00000362802 126 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU6-580P-201ENST00000365159 107 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 MIR206-201ENST00000384872 86 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 SNORD41.1-201ENST00000391000 69 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC078809.1-201ENST00000427601 140 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC073464.1-201ENST00000429823 534 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AL365184.2-201ENST00000431139 435 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC087499.4-201ENST00000448505 178 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU7-67P-201ENST00000459003 62 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU6-751P-201ENST00000516382 101 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 MIR4676-201ENST00000583078 72 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC005771.1-201ENST00000585581 349 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC005176.2-201ENST00000596933 147 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC005972.2-201ENST00000604690 348 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 SNORA28-201ENST00000606769 126 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC022306.3-201ENST00000619930 550 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 SCARNA4-201ENST00000629045 128 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 AC073869.9-201ENST00000641610 120 ntBASIC-0.16□□□□□ -2.43
COL7A1Q02388 MIR148A-201ENST00000362215 68 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-490P-201ENST00000362985 107 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNA5SP133-201ENST00000363368 119 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-324P-201ENST00000363957 106 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 SNORD114-29-201ENST00000364819 70 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 SNORA72.3-201ENST00000365074 132 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 SNORA20.2-201ENST00000383922 131 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 SNORA20B-201ENST00000384220 132 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-540P-201ENST00000384622 101 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 MRPL42P3-201ENST00000401492 326 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-855P-201ENST00000410395 104 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC009961.2-201ENST00000435771 251 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC010493.1-201ENST00000513479 292 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNA5SP54-201ENST00000516951 92 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 RNU6-201P-201ENST00000517100 61 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC026470.2-201ENST00000561492 181 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 MIR4752-201ENST00000579672 72 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC234772.3-201ENST00000602277 528 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC020891.4-201ENST00000605745 93 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 SNORD11B-201ENST00000607707 90 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AP000240.1-201ENST00000609910 452 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 TUSC7.1-201ENST00000610969 165 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC087683.2-201ENST00000611384 326 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 MIR7107-201ENST00000611489 80 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AC084368.1-201ENST00000620935 65 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 AL445984.1-201ENST00000637834 659 ntBASIC-0.16□□□□□ -2.44
COL7A1Q02388 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-462P-201ENST00000362659 105 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNY1P16-201ENST00000363063 111 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-403P-201ENST00000363163 104 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 SNORD14E-201ENST00000364009 85 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-597P-201ENST00000365620 102 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-434P-201ENST00000384376 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-24P-201ENST00000384440 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-809P-201ENST00000384461 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNY1P7-201ENST00000384743 110 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 SNORD110-201ENST00000408189 75 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-325P-201ENST00000411132 105 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AL593851.1-201ENST00000426171 157 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTND1P26-201ENST00000440488 538 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL7A1Q02388 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTND1P17-201ENST00000448961 204 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RPL30P15-201ENST00000457129 321 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU2-11P-201ENST00000459191 187 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC083904.1-201ENST00000487828 231 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC116562.3-201ENST00000506136 177 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC010424.1-201ENST00000506336 297 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC091133.4-201ENST00000511142 308 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU7-175P-201ENST00000515915 61 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-63P-201ENST00000516690 95 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU7-28P-201ENST00000516759 62 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTND2P38-201ENST00000522536 667 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AP003168.1-201ENST00000530091 307 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 CR383656.4-201ENST00000546909 122 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AL355375.2-201ENST00000574825 175 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms