Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL121890.5-201ENST00000620848 304 ntBASIC1.31□□□□□ -2.2
CX3CL1P78423 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CX3CL1P78423 Y_RNA.288-201ENST00000364854 92 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 MIR504-201ENST00000385065 83 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.3□□□□□ -2.2
CX3CL1P78423 HMGN2P32-201ENST00000444648 269 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 SNORD127-201ENST00000458892 86 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.3□□□□□ -2.2
CX3CL1P78423 AL512310.8-201ENST00000550183 120 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.3□□□□□ -2.2
CX3CL1P78423 MIR4255-201ENST00000579351 72 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 MIR3683-201ENST00000580847 82 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 AC087685.1-201ENST00000587507 141 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.3□□□□□ -2.2
CX3CL1P78423 MIR367-201ENST00000362299 68 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.82-201ENST00000363000 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.92-201ENST00000363043 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.235-201ENST00000364412 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.306-201ENST00000365015 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.312-201ENST00000365089 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.322-201ENST00000365151 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.352-201ENST00000365439 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 SNORA2.2-201ENST00000365473 135 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.556-201ENST00000384677 113 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 SNORD2.1-201ENST00000458762 69 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.650-201ENST00000459002 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.668-201ENST00000516233 93 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.777-201ENST00000516982 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 AC008507.4-201ENST00000585464 127 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.771-201ENST00000598668 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 AL513534.2-201ENST00000603836 250 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 Y_RNA.789-201ENST00000622480 102 ntBASIC1.29□□□□□ -2.2
CX3CL1P78423 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.2
CX3CL1P78423 Y_RNA.14-201ENST00000362415 103 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 SNORD14E-201ENST00000364009 85 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 RNU4-10P-201ENST00000364383 140 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 AL603910.2-201ENST00000407268 136 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 MIR1298-201ENST00000408783 112 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 RN7SKP101-201ENST00000411376 320 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.28□□□□□ -2.2
CX3CL1P78423 RPL30P7-201ENST00000479312 323 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 RNU6-322P-201ENST00000516010 103 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 MIR4724-201ENST00000579485 89 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 FAM106DP-201ENST00000586416 501 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 AL021707.8-201ENST00000609428 183 ntBASIC1.28□□□□□ -2.2
CX3CL1P78423 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CX3CL1P78423 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 Y_RNA.336-201ENST00000365307 109 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 Y_RNA.562-201ENST00000384695 113 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 MIR516B2-201ENST00000385190 85 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 MIR526A2-201ENST00000390198 65 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 AL451046.2-201ENST00000403074 277 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 Y_RNA.590-201ENST00000410140 107 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.27□□□□□ -2.21
CX3CL1P78423 RNU6-548P-201ENST00000517083 115 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 AC090142.3-201ENST00000519012 385 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 AC100767.1-201ENST00000528178 123 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.27□□□□□ -2.21
CX3CL1P78423 AL162730.1-201ENST00000605734 292 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 Y_RNA.802-201ENST00000614892 130 ntBASIC1.27□□□□□ -2.21
CX3CL1P78423 Y_RNA.54-201ENST00000362766 105 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 RNU6-196P-201ENST00000384315 107 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CX3CL1P78423 SNORD72-201ENST00000390994 80 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 MIR548H3-201ENST00000408771 118 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 AL591806.2-201ENST00000433122 173 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 RNU6-1132P-201ENST00000459214 107 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 RNU6-165P-201ENST00000517170 99 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 MIR4503-201ENST00000582187 83 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 MIR4282-201ENST00000583613 67 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 AC006006.1-201ENST00000603082 144 ntBASIC1.26□□□□□ -2.21
CX3CL1P78423 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CX3CL1P78423 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CX3CL1P78423 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CX3CL1P78423 Y_RNA.122-201ENST00000363331 96 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 Y_RNA.277-201ENST00000364754 102 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 SNORA8.3-201ENST00000384679 139 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 MIR802-201ENST00000390235 94 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 RNA5SP496-201ENST00000391240 109 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
CX3CL1P78423 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 Y_RNA.679-201ENST00000516416 91 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 RN7SKP88-201ENST00000516847 250 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.25□□□□□ -2.21
CX3CL1P78423 MIR4643-201ENST00000577473 78 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 GHRLOS.1-201ENST00000610995 70 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 7SK.8-201ENST00000612110 250 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 7SK.11-201ENST00000615477 250 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 U4.1-201ENST00000620349 87 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 7SK.13-201ENST00000622040 250 ntBASIC1.25□□□□□ -2.21
CX3CL1P78423 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CX3CL1P78423 RNU6-574P-201ENST00000384265 107 ntBASIC1.24□□□□□ -2.21
CX3CL1P78423 MIR136-201ENST00000385207 82 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms