Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 Y_RNA.146-201ENST00000363549 102 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 SNORD50B-201ENST00000364995 70 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 SNORD81.2-201ENST00000365153 76 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 RNU6-708P-201ENST00000384217 107 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 RNU6-855P-201ENST00000410395 104 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 SNRPGP10-201ENST00000432323 225 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 HMGN2P32-201ENST00000444648 269 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 AC067940.1-201ENST00000458411 300 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 SNORD123-201ENST00000459473 70 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 PRDX4P1-201ENST00000507189 574 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 RNU7-43P-201ENST00000516554 64 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 MTND4LP26-201ENST00000518144 282 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 U2.1-201ENST00000618978 145 ntBASIC0.51□□□□□ -2.33
CCNA1P78396 Y_RNA.329-201ENST00000365209 107 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 SNORA72-201ENST00000384339 132 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 RNU6-994P-201ENST00000410507 111 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 MTND1P2-201ENST00000430604 821 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 RNU6-470P-201ENST00000515954 104 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 RNU6-559P-201ENST00000516151 98 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 RNU6-1110P-201ENST00000516462 101 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 MIR5690-201ENST00000583739 73 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 AC022306.2-201ENST00000617563 647 ntBASIC0.5□□□□□ -2.33
CCNA1P78396 RNU6-654P-201ENST00000364373 107 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 MT-TL1-201ENST00000386347 75 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 RNU6-192P-201ENST00000391253 100 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 RNA5SP95-201ENST00000410319 137 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 Y_RNA.653-201ENST00000459091 95 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 AC093027.1-201ENST00000546698 429 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 AC134026.1-201ENST00000623249 2239 ntBASIC0.49□□□□□ -2.33
CCNA1P78396 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCNA1P78396 Y_RNA.248-201ENST00000364501 109 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 RNU6-1175P-201ENST00000365200 107 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 Y_RNA.368-201ENST00000365547 113 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCNA1P78396 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 AL590004.1-201ENST00000405321 300 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 MCFD2P1-201ENST00000417812 300 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.48□□□□□ -2.33
CCNA1P78396 RN7SKP295-201ENST00000517264 153 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 AC139792.2-201ENST00000624218 587 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 AC138305.3-201ENST00000624988 240 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 MIR4251-201ENST00000635819 61 ntBASIC0.48□□□□□ -2.33
CCNA1P78396 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CCNA1P78396 Y_RNA.148-201ENST00000363557 117 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 Y_RNA.230-201ENST00000364348 109 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 Y_RNA.474-201ENST00000384341 102 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 Y_RNA.570-201ENST00000384750 101 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 MIR559-201ENST00000385188 96 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 SNORD28B-201ENST00000390993 75 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 MIR1197-201ENST00000408818 88 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 AC036111.3-201ENST00000526389 112 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 AC022441.3-201ENST00000605737 136 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 U6atac.1-201ENST00000616025 117 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 MTND4LP32-201ENST00000636111 270 ntBASIC0.47□□□□□ -2.33
CCNA1P78396 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCNA1P78396 Y_RNA.27-201ENST00000362540 103 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 SNORD14E-201ENST00000364009 85 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 Y_RNA.251-201ENST00000364551 99 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 Y_RNA.341-201ENST00000365341 102 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 MIR1302-7-201ENST00000408841 72 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.46□□□□□ -2.34
CCNA1P78396 AC005042.3-201ENST00000453230 174 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 Y_RNA.714-201ENST00000517065 90 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 AC006600.1-201ENST00000572529 153 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 DEFB117-201ENST00000602356 141 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 AC113139.1-201ENST00000605049 239 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 AC133104.2-201ENST00000615272 193 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.46□□□□□ -2.34
CCNA1P78396 MIR6516-201ENST00000630554 81 ntBASIC0.46□□□□□ -2.34
CCNA1P78396 Y_RNA.259-201ENST00000364619 101 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 SNORA2B-201ENST00000384583 137 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 MIR570-201ENST00000384917 97 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 RNU6-710P-201ENST00000410424 105 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 MTCO2P27-201ENST00000420740 428 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 AC099799.1-201ENST00000439809 192 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 AL392103.1-201ENST00000447000 198 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 U8.19-201ENST00000459095 133 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.45□□□□□ -2.34
CCNA1P78396 RNU6-911P-201ENST00000516523 104 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 RNU6-699P-201ENST00000517081 110 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 AC024405.2-202ENST00000532731 184 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 AC012433.1-201ENST00000588916 398 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 POLR3GP1-201ENST00000594073 261 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 RBM11P1-201ENST00000604951 799 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 JPX_2.1-201ENST00000614161 69 ntBASIC0.45□□□□□ -2.34
CCNA1P78396 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.45□□□□□ -2.34
CCNA1P78396 Y_RNA.203-201ENST00000364106 102 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 Y_RNA.331-201ENST00000365267 102 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 RNU6-1323P-201ENST00000384025 107 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 SNORD38C-201ENST00000384381 69 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 MIR802-201ENST00000390235 94 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 RNU1-119P-201ENST00000391122 165 ntBASIC0.44□□□□□ -2.34
CCNA1P78396 SNORD111-201ENST00000408139 94 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms