Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-906P-201ENST00000384700 70 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 MTCYBP8-201ENST00000422855 651 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 AL356010.1-201ENST00000456364 102 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 MTCO3P38-201ENST00000468910 766 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 SNORA19.2-201ENST00000516013 114 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 RNU6-475P-201ENST00000516073 104 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 RNA5SP470-201ENST00000516463 106 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.14□□□□□ -2.59
RPS28P62857 MIR378F-201ENST00000578143 78 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 MIR4324-201ENST00000584846 72 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 MIR5692C1-201ENST00000585309 91 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 AL121757.2-201ENST00000611223 313 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 AC103705.1-201ENST00000619013 241 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 MIR6738-201ENST00000619620 64 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 AC084368.1-201ENST00000620935 65 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 AC005609.4-201ENST00000625071 447 ntBASIC-1.14□□□□□ -2.59
RPS28P62857 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.15□□□□□ -2.59
RPS28P62857 RNU6-282P-201ENST00000365357 103 ntBASIC-1.15□□□□□ -2.59
RPS28P62857 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
RPS28P62857 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.15□□□□□ -2.59
RPS28P62857 TPTE2P5-203ENST00000458118 728 ntBASIC-1.15□□□□□ -2.59
RPS28P62857 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
RPS28P62857 MTCO2P30-201ENST00000503662 364 ntBASIC-1.15□□□□□ -2.59
RPS28P62857 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 RNU6-740P-201ENST00000364734 105 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 SNORA22B-201ENST00000383876 138 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.16□□□□□ -2.6
RPS28P62857 MIR548AB-201ENST00000584917 84 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 AL391262.2-201ENST00000622466 494 ntBASIC-1.16□□□□□ -2.6
RPS28P62857 MIR30D-201ENST00000362283 70 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 RNU6-490P-201ENST00000362985 107 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 RNU6-281P-201ENST00000384212 103 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 MIR204-201ENST00000385200 110 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 RNA5SP475-201ENST00000410568 110 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.17□□□□□ -2.6
RPS28P62857 USP9YP16-201ENST00000430287 407 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 USP9YP23-201ENST00000455085 407 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 RNU7-67P-201ENST00000459003 62 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 MTND1P24-201ENST00000552175 861 ntBASIC-1.17□□□□□ -2.6
RPS28P62857 MIR410-201ENST00000362222 80 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 RNU6-403P-201ENST00000363163 104 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 RNU6-268P-201ENST00000364174 107 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 AC108059.2-201ENST00000434626 151 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 AL445193.1-201ENST00000441183 141 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 RNU7-63P-201ENST00000459054 62 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 MIR3674-201ENST00000636576 68 ntBASIC-1.18□□□□□ -2.6
RPS28P62857 RNU6-454P-201ENST00000364292 107 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 SNORA72-201ENST00000384339 132 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 RNU6-24P-201ENST00000384440 107 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 RNU6-721P-201ENST00000410155 105 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 MTND2P18-201ENST00000419962 1030 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 SNRPGP14-201ENST00000435400 219 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.19□□□□□ -2.6
RPS28P62857 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.19□□□□□ -2.6
RPS28P62857 RNU7-175P-201ENST00000515915 61 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 RN7SKP19-201ENST00000516016 252 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 RNA5SP480-201ENST00000516840 109 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 AC018462.2-201ENST00000605375 395 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 AP001506.1-201ENST00000615444 211 ntBASIC-1.19□□□□□ -2.6
RPS28P62857 RNU6-181P-201ENST00000363225 107 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 RNU6-726P-201ENST00000364680 107 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 RNU6-455P-201ENST00000384681 107 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 SNORD56B-201ENST00000384713 71 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 MTATP6P18-201ENST00000417994 673 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.2□□□□□ -2.6
RPS28P62857 RNU6-445P-201ENST00000516949 107 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.2□□□□□ -2.6
RPS28P62857 POLR3GP2-201ENST00000588366 668 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 AL022161.1-201ENST00000604390 213 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 RNU6-86P-201ENST00000606534 107 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 MIR6082-201ENST00000613604 109 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 JPX_2.1-201ENST00000614161 69 ntBASIC-1.2□□□□□ -2.6
RPS28P62857 RNU6-82P-201ENST00000363970 107 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 RNU6-996P-201ENST00000365438 107 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 RNU6-291P-201ENST00000384720 107 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 RNU6-535P-201ENST00000384722 107 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 RNU6-625P-201ENST00000459412 107 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 snoU109.3-201ENST00000459477 145 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.21□□□□□ -2.6
RPS28P62857 MIR4280-201ENST00000582178 76 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 AC092807.2-201ENST00000609367 243 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.21□□□□□ -2.6
RPS28P62857 Z97988.1-201ENST00000637697 135 ntBASIC-1.21□□□□□ -2.6
RPS28P62857 RNU4-16P-201ENST00000364737 141 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 RNU6-10P-201ENST00000384036 107 ntBASIC-1.22□□□□□ -2.6
RPS28P62857 SNORA24-201ENST00000384096 131 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms