Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SEC61A1P61619 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SEC61A1P61619 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SEC61A1P61619 SNORD114-1-201ENST00000362705 72 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 SNORD45.3-201ENST00000363836 72 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 Y_RNA.253-201ENST00000364562 112 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 RNU6-728P-201ENST00000365375 104 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 RNU6-746P-201ENST00000384112 109 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 RNA5SP496-201ENST00000391240 109 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 SNORD11-201ENST00000459124 84 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 AL021707.8-201ENST00000609428 183 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 JPX_2.1-201ENST00000614161 69 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 MIR3658-201ENST00000636291 56 ntBASIC1.75□□□□□ -2.13
SEC61A1P61619 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SEC61A1P61619 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SEC61A1P61619 RNU6-151P-201ENST00000364158 107 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 RNU6-643P-201ENST00000384018 107 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 MIR515-2-201ENST00000384883 83 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 MIR515-1-201ENST00000384884 83 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 AC245047.3-201ENST00000429428 127 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 SNRPGP10-201ENST00000432323 225 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 RPS27P1-201ENST00000450552 247 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 AL049830.1-201ENST00000468034 425 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 NDUFA4P2-201ENST00000489989 244 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 RNU2-56P-201ENST00000516826 190 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 Y_RNA.703-201ENST00000516846 111 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 AC024995.1-201ENST00000523014 93 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 AC104984.5-201ENST00000586878 94 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 uc_338.4-201ENST00000616635 176 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 AL591926.4-201ENST00000616895 298 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
SEC61A1P61619 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SEC61A1P61619 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
SEC61A1P61619 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 SNORD68-201ENST00000363214 84 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 RNU6-449P-201ENST00000383914 107 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 RNU6-239P-201ENST00000390990 99 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 RNA5SP100-201ENST00000410903 110 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 RNA5SP59-201ENST00000410922 110 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
SEC61A1P61619 UBL5P3-201ENST00000475112 231 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 HMGN1P7-201ENST00000491722 313 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 RNA5SP272-201ENST00000516095 111 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 SNORD116-25-201ENST00000516517 92 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 RNA5SP437-201ENST00000517249 129 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 MIR2681-201ENST00000581814 105 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 AC069114.2-201ENST00000604699 304 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.73□□□□□ -2.13
SEC61A1P61619 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SEC61A1P61619 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SEC61A1P61619 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SEC61A1P61619 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
SEC61A1P61619 SNORA4.2-201ENST00000365313 147 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SEC61A1P61619 RNA5SP57-201ENST00000459463 123 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 AC107027.2-201ENST00000512197 115 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 RNU7-149P-201ENST00000516739 59 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 Pinc.1-201ENST00000616452 154 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SEC61A1P61619 AP006437.1-201ENST00000641440 3685 ntBASIC1.72□□□□□ -2.13
SEC61A1P61619 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
SEC61A1P61619 Y_RNA.91-201ENST00000363042 107 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU6-1019P-201ENST00000364424 107 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 Y_RNA.265-201ENST00000364677 108 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU6-1336P-201ENST00000383886 109 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU6-484P-201ENST00000384016 107 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 MIR562-201ENST00000384894 95 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 MIR17-201ENST00000385012 84 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 SNORD72-201ENST00000390994 80 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU11-5P-201ENST00000391216 129 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 HMGN2P19-201ENST00000425149 265 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 HSPE1P9-201ENST00000440046 311 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 AC023449.1-201ENST00000454464 154 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.71□□□□□ -2.14
SEC61A1P61619 RNU7-94P-201ENST00000459576 63 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 AP002004.2-201ENST00000531656 154 ntBASIC1.71□□□□□ -2.14
SEC61A1P61619 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.71□□□□□ -2.14
SEC61A1P61619 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SEC61A1P61619 Y_RNA.432-201ENST00000384087 111 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 RNY3P5-201ENST00000384127 102 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 Y_RNA.521-201ENST00000384560 114 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 RNU6-768P-201ENST00000384683 107 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 RNU6-440P-201ENST00000390882 105 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 Y_RNA.580-201ENST00000391004 95 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 AL445646.1-201ENST00000431784 216 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 STAG3L5P-204ENST00000443759 179 ntBASIC1.7□□□□□ -2.14
SEC61A1P61619 AC005840.1-201ENST00000498412 377 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms