Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNU6-346P-201ENST00000516288 111 ntBASIC2.19□□□□□ -2.06
PER3P56645 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.19□□□□□ -2.06
PER3P56645 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.19□□□□□ -2.06
PER3P56645 AL353997.5-201ENST00000618886 171 ntBASIC2.19□□□□□ -2.06
PER3P56645 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.19□□□□□ -2.06
PER3P56645 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
PER3P56645 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
PER3P56645 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PER3P56645 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PER3P56645 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
PER3P56645 Y_RNA.486-201ENST00000384398 107 ntBASIC2.18□□□□□ -2.06
PER3P56645 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PER3P56645 SNORD72-201ENST00000390994 80 ntBASIC2.18□□□□□ -2.06
PER3P56645 MLLT10P1-201ENST00000418346 262 ntBASIC2.18□□□□□ -2.06
PER3P56645 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
PER3P56645 FTH1P12-201ENST00000432137 551 ntBASIC2.18□□□□□ -2.06
PER3P56645 AC069257.2-201ENST00000441819 155 ntBASIC2.18□□□□□ -2.06
PER3P56645 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
PER3P56645 AC107027.2-201ENST00000512197 115 ntBASIC2.18□□□□□ -2.06
PER3P56645 RNU6-197P-201ENST00000516680 100 ntBASIC2.18□□□□□ -2.06
PER3P56645 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.18□□□□□ -2.06
PER3P56645 Pinc.1-201ENST00000616452 154 ntBASIC2.18□□□□□ -2.06
PER3P56645 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PER3P56645 ZNF702P-202ENST00000434269 1966 ntBASIC2.18□□□□□ -2.06
PER3P56645 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PER3P56645 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PER3P56645 Y_RNA.91-201ENST00000363042 107 ntBASIC2.17□□□□□ -2.06
PER3P56645 SNORD68-201ENST00000363214 84 ntBASIC2.17□□□□□ -2.06
PER3P56645 U8.5-201ENST00000364528 136 ntBASIC2.17□□□□□ -2.06
PER3P56645 RNY1P5-201ENST00000383890 115 ntBASIC2.17□□□□□ -2.06
PER3P56645 MIR520A-201ENST00000384862 85 ntBASIC2.17□□□□□ -2.06
PER3P56645 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.17□□□□□ -2.06
PER3P56645 AC023449.1-201ENST00000454464 154 ntBASIC2.17□□□□□ -2.06
PER3P56645 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.17□□□□□ -2.06
PER3P56645 RNU6-1299P-201ENST00000516316 100 ntBASIC2.17□□□□□ -2.06
PER3P56645 RNA5SP281-201ENST00000516504 135 ntBASIC2.17□□□□□ -2.06
PER3P56645 Y_RNA.703-201ENST00000516846 111 ntBASIC2.17□□□□□ -2.06
PER3P56645 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
PER3P56645 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.17□□□□□ -2.06
PER3P56645 AC008507.4-201ENST00000585464 127 ntBASIC2.17□□□□□ -2.06
PER3P56645 MIR3658-201ENST00000636291 56 ntBASIC2.17□□□□□ -2.06
PER3P56645 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PER3P56645 MIRLET7C-201ENST00000362160 84 ntBASIC2.16□□□□□ -2.06
PER3P56645 RNA5SP456-201ENST00000364002 114 ntBASIC2.16□□□□□ -2.06
PER3P56645 Y_RNA.634-201ENST00000364811 113 ntBASIC2.16□□□□□ -2.06
PER3P56645 SNORD50B-201ENST00000364995 70 ntBASIC2.16□□□□□ -2.06
PER3P56645 RNU1-51P-201ENST00000365345 176 ntBASIC2.16□□□□□ -2.06
PER3P56645 RNU6-449P-201ENST00000383914 107 ntBASIC2.16□□□□□ -2.06
PER3P56645 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
PER3P56645 Y_RNA.432-201ENST00000384087 111 ntBASIC2.16□□□□□ -2.06
PER3P56645 RNU6-131P-201ENST00000391144 107 ntBASIC2.16□□□□□ -2.06
PER3P56645 RNA5SP482-201ENST00000391269 118 ntBASIC2.16□□□□□ -2.06
PER3P56645 STAG3L5P-204ENST00000443759 179 ntBASIC2.16□□□□□ -2.06
PER3P56645 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
PER3P56645 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
PER3P56645 RNU7-28P-201ENST00000516759 62 ntBASIC2.16□□□□□ -2.06
PER3P56645 AL160236.1-201ENST00000556317 195 ntBASIC2.16□□□□□ -2.06
PER3P56645 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
PER3P56645 U1.36-201ENST00000620684 176 ntBASIC2.16□□□□□ -2.06
PER3P56645 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.16□□□□□ -2.06
PER3P56645 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PER3P56645 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PER3P56645 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PER3P56645 Y_RNA.265-201ENST00000364677 108 ntBASIC2.15□□□□□ -2.07
PER3P56645 MIR764-201ENST00000390811 85 ntBASIC2.15□□□□□ -2.07
PER3P56645 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.15□□□□□ -2.07
PER3P56645 AL603825.1-201ENST00000438481 80 ntBASIC2.15□□□□□ -2.07
PER3P56645 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.15□□□□□ -2.07
PER3P56645 RNA5SP153-201ENST00000516498 76 ntBASIC2.15□□□□□ -2.07
PER3P56645 AC097639.2-201ENST00000603159 172 ntBASIC2.15□□□□□ -2.07
PER3P56645 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.15□□□□□ -2.07
PER3P56645 MIR1291-201ENST00000627649 87 ntBASIC2.15□□□□□ -2.07
PER3P56645 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.15□□□□□ -2.07
PER3P56645 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.15□□□□□ -2.07
PER3P56645 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PER3P56645 RNU6-978P-201ENST00000364371 103 ntBASIC2.14□□□□□ -2.07
PER3P56645 Y_RNA.337-201ENST00000365312 102 ntBASIC2.14□□□□□ -2.07
PER3P56645 RNU6-768P-201ENST00000384683 107 ntBASIC2.14□□□□□ -2.07
PER3P56645 SNORD116-25-201ENST00000516517 92 ntBASIC2.14□□□□□ -2.07
PER3P56645 MIR378D2-201ENST00000580636 98 ntBASIC2.14□□□□□ -2.07
PER3P56645 DNAJC19P2-201ENST00000593340 302 ntBASIC2.14□□□□□ -2.07
PER3P56645 Y_RNA.778-201ENST00000620203 90 ntBASIC2.14□□□□□ -2.07
PER3P56645 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PER3P56645 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PER3P56645 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
PER3P56645 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.14□□□□□ -2.07
PER3P56645 Y_RNA.66-201ENST00000362862 102 ntBASIC2.13□□□□□ -2.07
PER3P56645 RNU6-151P-201ENST00000364158 107 ntBASIC2.13□□□□□ -2.07
PER3P56645 Y_RNA.400-201ENST00000383963 111 ntBASIC2.13□□□□□ -2.07
PER3P56645 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
PER3P56645 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
PER3P56645 AC026436.1-201ENST00000510537 270 ntBASIC2.13□□□□□ -2.07
PER3P56645 SNORA31.17-201ENST00000516953 127 ntBASIC2.13□□□□□ -2.07
PER3P56645 RNU6-1116P-201ENST00000517269 99 ntBASIC2.13□□□□□ -2.07
PER3P56645 AC087685.1-201ENST00000587507 141 ntBASIC2.13□□□□□ -2.07
PER3P56645 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
PER3P56645 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
PER3P56645 RNA5SP276-201ENST00000362580 94 ntBASIC2.12□□□□□ -2.07
PER3P56645 RNA5SP99-201ENST00000364020 114 ntBASIC2.12□□□□□ -2.07
PER3P56645 RNU6-1031P-201ENST00000384773 107 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms