Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.94□□□□□ -2.56
POLR2JP52435 MTATP6P18-201ENST00000417994 673 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 CYCSP46-201ENST00000423569 204 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 HMGN1P33-201ENST00000432945 451 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 AL033528.1-201ENST00000453780 140 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 RNU7-175P-201ENST00000515915 61 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 AC092807.2-201ENST00000609367 243 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 AL391834.2-201ENST00000609982 546 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 AC073534.2-201ENST00000620377 381 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 AL391262.2-201ENST00000622466 494 ntBASIC-0.94□□□□□ -2.56
POLR2JP52435 MIR101-2-201ENST00000362195 79 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 RNU6-297P-201ENST00000384636 107 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 EIF1P2-201ENST00000428233 350 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 USP9YP16-201ENST00000430287 407 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 MTND4P19-201ENST00000446659 478 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 USP9YP23-201ENST00000455085 407 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 RNU7-67P-201ENST00000459003 62 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 RNU7-63P-201ENST00000459054 62 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 AC010424.1-201ENST00000506336 297 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 SNORA18.6-201ENST00000516792 115 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 RNU6-765P-201ENST00000516916 99 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 AC131281.1-201ENST00000522984 164 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 MIR4509-3-201ENST00000578671 94 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 MIR4509-2-201ENST00000583920 94 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 MIR4436A-201ENST00000585278 85 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 AC011458.1-201ENST00000604034 617 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 AC006441.5-201ENST00000612680 209 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 MIR4509-1-201ENST00000618224 94 ntBASIC-0.95□□□□□ -2.56
POLR2JP52435 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.95□□□□□ -2.56
POLR2JP52435 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.96□□□□□ -2.56
POLR2JP52435 SNORD114-14-201ENST00000362723 75 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU6-403P-201ENST00000363163 104 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 SNORA1-201ENST00000384107 130 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU6-535P-201ENST00000384722 107 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 AC108059.2-201ENST00000434626 151 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU6-625P-201ENST00000459412 107 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RPL7P42-201ENST00000481005 679 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU6-958P-201ENST00000516995 106 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU2-12P-201ENST00000517216 168 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 ELOCP32-201ENST00000548625 324 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 MTND5P34-201ENST00000568888 325 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.96□□□□□ -2.56
POLR2JP52435 AL133255.1-201ENST00000606374 441 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 AP001330.5-201ENST00000607176 411 ntBASIC-0.96□□□□□ -2.56
POLR2JP52435 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.96□□□□□ -2.56
POLR2JP52435 RNU6-767P-201ENST00000384132 107 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 RNU6-708P-201ENST00000384217 107 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
POLR2JP52435 SNORD75.1-201ENST00000408373 60 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 AL022718.1-201ENST00000412004 84 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.97□□□□□ -2.56
POLR2JP52435 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.97□□□□□ -2.56
POLR2JP52435 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.97□□□□□ -2.56
POLR2JP52435 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 AC008507.4-201ENST00000585464 127 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.97□□□□□ -2.56
POLR2JP52435 RNY1P16-201ENST00000363063 111 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 SNORA69-201ENST00000383895 132 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.98□□□□□ -2.57
POLR2JP52435 AC107297.1-201ENST00000459991 176 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 AC109347.2-201ENST00000610220 349 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 AC084368.1-201ENST00000620935 65 ntBASIC-0.98□□□□□ -2.57
POLR2JP52435 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 RNU6-38P-201ENST00000384085 107 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 SNORD72-201ENST00000390994 80 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 SNORA3B-201ENST00000391305 131 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 AL603910.2-201ENST00000407268 136 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 MIR1912-201ENST00000410389 80 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 MIR4493-201ENST00000584016 73 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 AC096720.1-201ENST00000604441 183 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 AC245008.1-201ENST00000608123 476 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 AL354950.2-201ENST00000617939 290 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 AC005609.4-201ENST00000625071 447 ntBASIC-0.99□□□□□ -2.57
POLR2JP52435 Y_RNA.170-201ENST00000363746 110 ntBASIC-1□□□□□ -2.57
POLR2JP52435 RNA5SP245-201ENST00000364239 121 ntBASIC-1□□□□□ -2.57
POLR2JP52435 U8.6-201ENST00000364939 135 ntBASIC-1□□□□□ -2.57
POLR2JP52435 MIR122-201ENST00000385044 85 ntBASIC-1□□□□□ -2.57
POLR2JP52435 U8.15-201ENST00000390947 134 ntBASIC-1□□□□□ -2.57
POLR2JP52435 AL031003.1-201ENST00000404229 172 ntBASIC-1□□□□□ -2.57
POLR2JP52435 RNU6-248P-201ENST00000410720 107 ntBASIC-1□□□□□ -2.57
POLR2JP52435 RNU2-61P-201ENST00000411069 191 ntBASIC-1□□□□□ -2.57
POLR2JP52435 AC096949.1-201ENST00000412047 152 ntBASIC-1□□□□□ -2.57
POLR2JP52435 MTCO2P8-201ENST00000412213 658 ntBASIC-1□□□□□ -2.57
POLR2JP52435 MTND1P11-201ENST00000456661 876 ntBASIC-1□□□□□ -2.57
POLR2JP52435 RNU2-11P-201ENST00000459191 187 ntBASIC-1□□□□□ -2.57
POLR2JP52435 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1□□□□□ -2.57
POLR2JP52435 RNU6-1265P-201ENST00000516342 103 ntBASIC-1□□□□□ -2.57
POLR2JP52435 LRRC34P1-201ENST00000542742 915 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms