Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU6-674P-201ENST00000363831 107 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 Y_RNA.262-201ENST00000364641 102 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 MIR626-201ENST00000385032 94 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 RNU6-381P-201ENST00000391259 108 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 AP1B1P2-201ENST00000416196 106 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.74□□□□□ -2.13
CLCN3P51790 AL138752.1-201ENST00000452964 351 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 RNY3P16-201ENST00000516338 101 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 RNU7-116P-201ENST00000516940 62 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 BX248123.2-201ENST00000606318 124 ntBASIC1.74□□□□□ -2.13
CLCN3P51790 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLCN3P51790 RNU6-682P-201ENST00000363843 106 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 RNU6-60P-201ENST00000364792 103 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 RNU6-144P-201ENST00000383951 107 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 Y_RNA.555-201ENST00000384673 110 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 MTCO2P33-201ENST00000402100 465 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 snoU13.27-201ENST00000459278 104 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AC117454.1-201ENST00000491120 168 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.73□□□□□ -2.13
CLCN3P51790 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AC073413.2-201ENST00000604332 360 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AC022217.4-201ENST00000604389 163 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AL021707.8-201ENST00000609428 183 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 AC068647.2-201ENST00000637380 353 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.73□□□□□ -2.13
CLCN3P51790 AC100821.1-201ENST00000523153 2479 ntBASIC1.73□□□□□ -2.13
CLCN3P51790 snoU2_19.4-201ENST00000364329 80 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 SNORA72-201ENST00000384339 132 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 MIR520G-201ENST00000385064 90 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.72□□□□□ -2.13
CLCN3P51790 RNU7-95P-201ENST00000459222 64 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 MIR6079-201ENST00000635807 62 ntBASIC1.72□□□□□ -2.13
CLCN3P51790 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.72□□□□□ -2.13
CLCN3P51790 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 RNU4-17P-201ENST00000365598 141 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 RNU6-376P-201ENST00000384731 106 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 SNORA36B-201ENST00000410438 131 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 RN7SKP200-201ENST00000410564 320 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 COX6CP10-201ENST00000416832 224 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 AC245047.3-201ENST00000429428 127 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 MTND5P15-201ENST00000434246 349 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 RNU6-182P-201ENST00000516970 105 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 RNU6-341P-201ENST00000516973 96 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 AL358944.1-201ENST00000528537 144 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 DNAJC19P9-201ENST00000555084 351 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 POLR3GP1-201ENST00000594073 261 ntBASIC1.71□□□□□ -2.14
CLCN3P51790 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CLCN3P51790 Y_RNA.121-201ENST00000363309 113 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 RNU6-1205P-201ENST00000363625 106 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 RNU6-1020P-201ENST00000363684 107 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 Y_RNA.180-201ENST00000363867 113 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 Y_RNA.308-201ENST00000365043 101 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 RNU6-969P-201ENST00000383900 105 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 Y_RNA.572-201ENST00000384757 98 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CLCN3P51790 RNA5SP109-201ENST00000391010 116 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 JTBP1-201ENST00000441314 247 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 AL606517.2-201ENST00000442855 241 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 AC091021.1-201ENST00000468051 388 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.7□□□□□ -2.14
CLCN3P51790 SCARNA8-201ENST00000515924 131 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 MIR4709-201ENST00000577272 72 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 AC072026.1-201ENST00000605023 201 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 Y_RNA.802-201ENST00000614892 130 ntBASIC1.7□□□□□ -2.14
CLCN3P51790 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CLCN3P51790 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 RNU4-10P-201ENST00000364383 140 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 Y_RNA.233-201ENST00000364407 101 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 Y_RNA.240-201ENST00000364469 95 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 RNU6-923P-201ENST00000364753 107 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 RNU6-886P-201ENST00000384319 105 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 SNORA8.3-201ENST00000384679 139 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 RNU6-493P-201ENST00000391321 108 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 Y_RNA.793-201ENST00000411222 111 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 PIGPP3-201ENST00000425307 415 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 RNU6-437P-201ENST00000459408 95 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.69□□□□□ -2.14
CLCN3P51790 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 RNU6-1096P-201ENST00000517089 102 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 AC022559.1-201ENST00000520905 205 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 AP002392.1-201ENST00000537692 208 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 AL929325.1-201ENST00000603096 117 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 AL512598.1-201ENST00000610158 273 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 MIR8054-201ENST00000620877 86 ntBASIC1.69□□□□□ -2.14
CLCN3P51790 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLCN3P51790 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLCN3P51790 RNU6-136P-201ENST00000384663 107 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 Y_RNA.571-201ENST00000384753 98 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 RNU6-1053P-201ENST00000515930 101 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 RN7SKP164-201ENST00000516138 266 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 RNU7-28P-201ENST00000516759 62 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 AC011604.1-201ENST00000545978 196 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms