Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
USP11P51784 FTH1P12-201ENST00000432137 551 ntBASIC3□□□□□ -1.93
USP11P51784 AL109933.2-201ENST00000452651 260 ntBASIC3□□□□□ -1.93
USP11P51784 RNU6-1041P-201ENST00000516254 102 ntBASIC3□□□□□ -1.93
USP11P51784 RNU6-1146P-201ENST00000516282 102 ntBASIC3□□□□□ -1.93
USP11P51784 RNU6-109P-201ENST00000516364 107 ntBASIC3□□□□□ -1.93
USP11P51784 RNU6-184P-201ENST00000516514 107 ntBASIC3□□□□□ -1.93
USP11P51784 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3□□□□□ -1.93
USP11P51784 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3□□□□□ -1.93
USP11P51784 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP11P51784 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3□□□□□ -1.93
USP11P51784 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
USP11P51784 AL596211.1-201ENST00000569873 2277 ntBASIC3□□□□□ -1.93
USP11P51784 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3□□□□□ -1.93
USP11P51784 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
USP11P51784 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP11P51784 RNU6-349P-201ENST00000362402 107 ntBASIC2.99□□□□□ -1.93
USP11P51784 SNORA1B-201ENST00000362535 133 ntBASIC2.99□□□□□ -1.93
USP11P51784 MIR590-201ENST00000385008 97 ntBASIC2.99□□□□□ -1.93
USP11P51784 SNORA26.2-201ENST00000390922 122 ntBASIC2.99□□□□□ -1.93
USP11P51784 SNORA19.1-201ENST00000410656 129 ntBASIC2.99□□□□□ -1.93
USP11P51784 SNORA40.13-201ENST00000516379 120 ntBASIC2.99□□□□□ -1.93
USP11P51784 RNY4P20-201ENST00000516678 93 ntBASIC2.99□□□□□ -1.93
USP11P51784 AL358944.1-201ENST00000528537 144 ntBASIC2.99□□□□□ -1.93
USP11P51784 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
USP11P51784 MIR4635-201ENST00000583759 79 ntBASIC2.99□□□□□ -1.93
USP11P51784 AL359075.3-201ENST00000613288 217 ntBASIC2.99□□□□□ -1.93
USP11P51784 AL589743.1-201ENST00000551932 2712 ntBASIC2.99□□□□□ -1.93
USP11P51784 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP11P51784 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP11P51784 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
USP11P51784 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
USP11P51784 Y_RNA.49-201ENST00000362714 112 ntBASIC2.98□□□□□ -1.93
USP11P51784 RNA5SP126-201ENST00000365092 109 ntBASIC2.98□□□□□ -1.93
USP11P51784 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
USP11P51784 SNORA48.11-201ENST00000517015 89 ntBASIC2.98□□□□□ -1.93
USP11P51784 AC004486.1-201ENST00000546846 233 ntBASIC2.98□□□□□ -1.93
USP11P51784 AC087685.1-201ENST00000587507 141 ntBASIC2.98□□□□□ -1.93
USP11P51784 AC022217.4-201ENST00000604389 163 ntBASIC2.98□□□□□ -1.93
USP11P51784 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP11P51784 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP11P51784 RNY4P6-201ENST00000363667 96 ntBASIC2.97□□□□□ -1.93
USP11P51784 SNORD114-6-201ENST00000364393 72 ntBASIC2.97□□□□□ -1.93
USP11P51784 SNORA2.2-201ENST00000365473 135 ntBASIC2.97□□□□□ -1.93
USP11P51784 MIR548O-201ENST00000408583 114 ntBASIC2.97□□□□□ -1.93
USP11P51784 EDDM3CP-201ENST00000415977 425 ntBASIC2.97□□□□□ -1.93
USP11P51784 AC018868.1-201ENST00000491307 315 ntBASIC2.97□□□□□ -1.93
USP11P51784 AC134878.1-201ENST00000619901 243 ntBASIC2.97□□□□□ -1.93
USP11P51784 FO624990.1-201ENST00000636373 85 ntBASIC2.97□□□□□ -1.93
USP11P51784 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP11P51784 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.97□□□□□ -1.93
USP11P51784 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP11P51784 RNU6-461P-201ENST00000364195 107 ntBASIC2.96□□□□□ -1.94
USP11P51784 Y_RNA.344-201ENST00000365381 112 ntBASIC2.96□□□□□ -1.94
USP11P51784 RNU6-1104P-201ENST00000384723 104 ntBASIC2.96□□□□□ -1.94
USP11P51784 RNY1P7-201ENST00000384743 110 ntBASIC2.96□□□□□ -1.94
USP11P51784 MIR592-201ENST00000384959 97 ntBASIC2.96□□□□□ -1.94
USP11P51784 SUMO1P4-201ENST00000429430 302 ntBASIC2.96□□□□□ -1.94
USP11P51784 SNRPGP14-201ENST00000435400 219 ntBASIC2.96□□□□□ -1.94
USP11P51784 AL353689.1-201ENST00000438895 199 ntBASIC2.96□□□□□ -1.94
USP11P51784 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.96□□□□□ -1.94
USP11P51784 RNU7-25P-201ENST00000516544 62 ntBASIC2.96□□□□□ -1.94
USP11P51784 AC068339.1-201ENST00000526965 141 ntBASIC2.96□□□□□ -1.94
USP11P51784 MIR5009-201ENST00000578736 100 ntBASIC2.96□□□□□ -1.94
USP11P51784 AL356280.1-201ENST00000603614 379 ntBASIC2.96□□□□□ -1.94
USP11P51784 AC006441.5-201ENST00000612680 209 ntBASIC2.96□□□□□ -1.94
USP11P51784 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP11P51784 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
USP11P51784 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP11P51784 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP11P51784 RNU6-414P-201ENST00000363705 104 ntBASIC2.95□□□□□ -1.94
USP11P51784 RNU6-690P-201ENST00000365242 106 ntBASIC2.95□□□□□ -1.94
USP11P51784 RNU6-1189P-201ENST00000383958 107 ntBASIC2.95□□□□□ -1.94
USP11P51784 Y_RNA.410-201ENST00000383992 113 ntBASIC2.95□□□□□ -1.94
USP11P51784 RNU6-1113P-201ENST00000384348 107 ntBASIC2.95□□□□□ -1.94
USP11P51784 Y_RNA.544-201ENST00000384650 113 ntBASIC2.95□□□□□ -1.94
USP11P51784 Y_RNA.547-201ENST00000384654 119 ntBASIC2.95□□□□□ -1.94
USP11P51784 Y_RNA.558-201ENST00000384685 113 ntBASIC2.95□□□□□ -1.94
USP11P51784 MIR196B-201ENST00000384852 84 ntBASIC2.95□□□□□ -1.94
USP11P51784 RNU6-938P-201ENST00000411285 103 ntBASIC2.95□□□□□ -1.94
USP11P51784 CYP2C59P-201ENST00000457790 269 ntBASIC2.95□□□□□ -1.94
USP11P51784 AL049830.1-201ENST00000468034 425 ntBASIC2.95□□□□□ -1.94
USP11P51784 RPPH1-2P-201ENST00000516688 293 ntBASIC2.95□□□□□ -1.94
USP11P51784 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.95□□□□□ -1.94
USP11P51784 AC062037.1-201ENST00000605302 128 ntBASIC2.95□□□□□ -1.94
USP11P51784 AL353149.1-201ENST00000610667 244 ntBASIC2.95□□□□□ -1.94
USP11P51784 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
USP11P51784 Y_RNA.37-201ENST00000362606 108 ntBASIC2.94□□□□□ -1.94
USP11P51784 RNU6-268P-201ENST00000364174 107 ntBASIC2.94□□□□□ -1.94
USP11P51784 RNU1-142P-201ENST00000516682 145 ntBASIC2.94□□□□□ -1.94
USP11P51784 SNORD36C-201ENST00000516733 66 ntBASIC2.94□□□□□ -1.94
USP11P51784 RNU6-826P-201ENST00000516827 104 ntBASIC2.94□□□□□ -1.94
USP11P51784 RNU6-667P-201ENST00000517186 102 ntBASIC2.94□□□□□ -1.94
USP11P51784 SUMO2P16-201ENST00000519475 264 ntBASIC2.94□□□□□ -1.94
USP11P51784 AC002984.1-201ENST00000591692 448 ntBASIC2.94□□□□□ -1.94
USP11P51784 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USP11P51784 ZNF720P1-201ENST00000562403 1939 ntBASIC2.93□□□□□ -1.94
USP11P51784 Y_RNA.298-201ENST00000364960 107 ntBASIC2.93□□□□□ -1.94
USP11P51784 RNU6-220P-201ENST00000390919 107 ntBASIC2.93□□□□□ -1.94
USP11P51784 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms