Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC091925.1-201ENST00000623204 462 ntBASIC0.43□□□□□ -2.34
CEACAM3P40198 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
CEACAM3P40198 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CEACAM3P40198 RNU6-490P-201ENST00000362985 107 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 Y_RNA.796-201ENST00000364268 102 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 Y_RNA.248-201ENST00000364501 109 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 Y_RNA.799-201ENST00000364992 102 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 Y_RNA.370-201ENST00000365589 108 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 RNA5SP95-201ENST00000410319 137 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 AC096644.2-201ENST00000429278 159 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 NDUFA4P2-201ENST00000489989 244 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 RNU6-559P-201ENST00000516151 98 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 AC127455.1-201ENST00000565496 145 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 VN1R91P-201ENST00000594377 169 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 AC007742.2-201ENST00000618226 398 ntBASIC0.42□□□□□ -2.34
CEACAM3P40198 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CEACAM3P40198 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
CEACAM3P40198 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
CEACAM3P40198 RNU6-369P-201ENST00000362515 102 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 RNU6-1209P-201ENST00000363655 107 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 Y_RNA.168-201ENST00000363740 102 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 U8.7-201ENST00000364940 136 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 RNY1P14-201ENST00000384426 108 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 SNORA2B-201ENST00000384583 137 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 RNU6-876P-201ENST00000391295 104 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.41□□□□□ -2.34
CEACAM3P40198 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.41□□□□□ -2.34
CEACAM3P40198 MIR2115-201ENST00000516657 100 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 RNU6-699P-201ENST00000517081 110 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 AP003484.1-201ENST00000530974 250 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 AC093027.1-201ENST00000546698 429 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.41□□□□□ -2.34
CEACAM3P40198 AC011195.1-201ENST00000578177 177 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 DEFB117-201ENST00000602356 141 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 AL355073.2-201ENST00000612106 557 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 AC092794.1-201ENST00000612734 582 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 Pinc.1-201ENST00000616452 154 ntBASIC0.41□□□□□ -2.34
CEACAM3P40198 Y_RNA.122-201ENST00000363331 96 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 RNU6-268P-201ENST00000364174 107 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 RNU6-442P-201ENST00000383968 104 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 Y_RNA.462-201ENST00000384268 102 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 MIR570-201ENST00000384917 97 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC005534.2-201ENST00000431047 433 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 HMGN1P10-201ENST00000474557 553 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 RNU7-115P-201ENST00000516433 55 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC005730.3-201ENST00000583067 366 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 MIR5188-201ENST00000583467 113 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC008507.4-201ENST00000585464 127 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC104695.3-201ENST00000604052 296 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC025253.1-201ENST00000613623 543 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 JPX_2.1-201ENST00000614161 69 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 AC133104.2-201ENST00000615272 193 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 MIR4272-201ENST00000635924 64 ntBASIC0.4□□□□□ -2.35
CEACAM3P40198 RNU1-133P-201ENST00000364867 167 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 RNU6-1040P-201ENST00000383974 107 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 SNORD116-29-201ENST00000384516 83 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 U8.17-201ENST00000391292 132 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 RPL23AP54-201ENST00000495129 419 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 AC006600.1-201ENST00000572529 153 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 U6atac.1-201ENST00000616025 117 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 MIR548AY-201ENST00000617669 107 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 MIR6513-201ENST00000621188 64 ntBASIC0.39□□□□□ -2.35
CEACAM3P40198 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CEACAM3P40198 MIR1-1-201ENST00000362147 71 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 RNU6-580P-201ENST00000365159 107 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 Y_RNA.537-201ENST00000384626 109 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 RNU2-13P-201ENST00000515909 113 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 RNU6-277P-201ENST00000516272 106 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 MIR548AO-201ENST00000579992 96 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 SNORA4-201ENST00000584302 138 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.38□□□□□ -2.35
CEACAM3P40198 AC012433.1-201ENST00000588916 398 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 MTND4LP32-201ENST00000636111 270 ntBASIC0.38□□□□□ -2.35
CEACAM3P40198 MIR377-201ENST00000362145 69 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNU6-674P-201ENST00000363831 107 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 SNORD45.3-201ENST00000363836 72 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 Y_RNA.331-201ENST00000365267 102 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNU6-396P-201ENST00000365369 105 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNY1P8-201ENST00000383970 114 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 Y_RNA.463-201ENST00000384271 102 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 SNORA51.10-201ENST00000384418 136 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 MT-TN-201ENST00000387400 73 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNY4P36-201ENST00000391116 96 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 MTCO2P33-201ENST00000402100 465 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 AL603910.2-201ENST00000407268 136 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNU6-177P-201ENST00000411257 104 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 MIR4300-201ENST00000581016 96 ntBASIC0.37□□□□□ -2.35
CEACAM3P40198 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms