Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU2-12P-201ENST00000517216 168 ntBASIC1.74□□□□□ -2.13
KRT9P35527 AC019176.1-201ENST00000518519 225 ntBASIC1.74□□□□□ -2.13
KRT9P35527 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.74□□□□□ -2.13
KRT9P35527 MIR3145-201ENST00000580727 82 ntBASIC1.74□□□□□ -2.13
KRT9P35527 DEFB117-201ENST00000602356 141 ntBASIC1.74□□□□□ -2.13
KRT9P35527 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRT9P35527 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.74□□□□□ -2.13
KRT9P35527 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
KRT9P35527 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRT9P35527 Y_RNA.217-201ENST00000364214 105 ntBASIC1.73□□□□□ -2.13
KRT9P35527 Y_RNA.262-201ENST00000364641 102 ntBASIC1.73□□□□□ -2.13
KRT9P35527 Y_RNA.308-201ENST00000365043 101 ntBASIC1.73□□□□□ -2.13
KRT9P35527 Y_RNA.329-201ENST00000365209 107 ntBASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-47P-201ENST00000383866 107 ntBASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-746P-201ENST00000384112 109 ntBASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-376P-201ENST00000384731 106 ntBASIC1.73□□□□□ -2.13
KRT9P35527 MIR513A1-201ENST00000385138 129 ntBASIC1.73□□□□□ -2.13
KRT9P35527 AC108667.1-201ENST00000428618 249 ntBASIC1.73□□□□□ -2.13
KRT9P35527 Y_RNA.641-201ENST00000459414 105 ntBASIC1.73□□□□□ -2.13
KRT9P35527 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.73□□□□□ -2.13
KRT9P35527 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
KRT9P35527 Y_RNA.662-201ENST00000516028 97 ntBASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-1278P-201ENST00000516130 107 ntBASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-966P-201ENST00000516479 104 ntBASIC1.73□□□□□ -2.13
KRT9P35527 AP000942.3-201ENST00000603702 160 ntBASIC1.73□□□□□ -2.13
KRT9P35527 snoU18.1-201ENST00000629629 71 ntBASIC1.73□□□□□ -2.13
KRT9P35527 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
KRT9P35527 RNU6-774P-201ENST00000363238 107 ntBASIC1.72□□□□□ -2.13
KRT9P35527 RNU6-682P-201ENST00000363843 106 ntBASIC1.72□□□□□ -2.13
KRT9P35527 SNORD115-30-201ENST00000364117 82 ntBASIC1.72□□□□□ -2.13
KRT9P35527 Y_RNA.233-201ENST00000364407 101 ntBASIC1.72□□□□□ -2.13
KRT9P35527 RNU6-923P-201ENST00000364753 107 ntBASIC1.72□□□□□ -2.13
KRT9P35527 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.72□□□□□ -2.13
KRT9P35527 RNU6-211P-201ENST00000384047 107 ntBASIC1.72□□□□□ -2.13
KRT9P35527 SNORA12.1-201ENST00000390873 148 ntBASIC1.72□□□□□ -2.13
KRT9P35527 PCNPP3-201ENST00000393579 471 ntBASIC1.72□□□□□ -2.13
KRT9P35527 AL034345.1-201ENST00000407768 123 ntBASIC1.72□□□□□ -2.13
KRT9P35527 SNORD2.1-201ENST00000458762 69 ntBASIC1.72□□□□□ -2.13
KRT9P35527 AC091021.1-201ENST00000468051 388 ntBASIC1.72□□□□□ -2.13
KRT9P35527 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
KRT9P35527 RNU6-436P-201ENST00000516171 114 ntBASIC1.72□□□□□ -2.13
KRT9P35527 RNY3P16-201ENST00000516338 101 ntBASIC1.72□□□□□ -2.13
KRT9P35527 AC022559.1-201ENST00000520905 205 ntBASIC1.72□□□□□ -2.13
KRT9P35527 AC011921.3-201ENST00000605540 361 ntBASIC1.72□□□□□ -2.13
KRT9P35527 AL365265.1-201ENST00000621045 234 ntBASIC1.72□□□□□ -2.13
KRT9P35527 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.72□□□□□ -2.13
KRT9P35527 SNORD114-7-201ENST00000362520 77 ntBASIC1.71□□□□□ -2.14
KRT9P35527 SNORD33-201ENST00000362761 85 ntBASIC1.71□□□□□ -2.14
KRT9P35527 RNU6-117P-201ENST00000365415 107 ntBASIC1.71□□□□□ -2.14
KRT9P35527 Y_RNA.361-201ENST00000365515 120 ntBASIC1.71□□□□□ -2.14
KRT9P35527 RNU6-918P-201ENST00000391219 106 ntBASIC1.71□□□□□ -2.14
KRT9P35527 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.71□□□□□ -2.14
KRT9P35527 BTF3P11-201ENST00000426582 477 ntBASIC1.71□□□□□ -2.14
KRT9P35527 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
KRT9P35527 AL392103.1-201ENST00000447000 198 ntBASIC1.71□□□□□ -2.14
KRT9P35527 RNU6-902P-201ENST00000517212 91 ntBASIC1.71□□□□□ -2.14
KRT9P35527 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
KRT9P35527 MIR3937-201ENST00000580135 106 ntBASIC1.71□□□□□ -2.14
KRT9P35527 MIR4781-201ENST00000585250 76 ntBASIC1.71□□□□□ -2.14
KRT9P35527 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRT9P35527 Y_RNA.226-201ENST00000364337 114 ntBASIC1.7□□□□□ -2.14
KRT9P35527 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
KRT9P35527 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
KRT9P35527 RNU6-493P-201ENST00000391321 108 ntBASIC1.7□□□□□ -2.14
KRT9P35527 RNU6-710P-201ENST00000410424 105 ntBASIC1.7□□□□□ -2.14
KRT9P35527 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
KRT9P35527 STAG3L5P-204ENST00000443759 179 ntBASIC1.7□□□□□ -2.14
KRT9P35527 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRT9P35527 MIR3683-201ENST00000580847 82 ntBASIC1.7□□□□□ -2.14
KRT9P35527 AC091178.2-201ENST00000584401 117 ntBASIC1.7□□□□□ -2.14
KRT9P35527 AP001485.1-201ENST00000604799 199 ntBASIC1.7□□□□□ -2.14
KRT9P35527 U6.106-201ENST00000636360 105 ntBASIC1.7□□□□□ -2.14
KRT9P35527 WWP1P1-201ENST00000466609 2769 ntBASIC1.7□□□□□ -2.14
KRT9P35527 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRT9P35527 RNU6-1272P-201ENST00000362776 107 ntBASIC1.69□□□□□ -2.14
KRT9P35527 Y_RNA.118-201ENST00000363300 101 ntBASIC1.69□□□□□ -2.14
KRT9P35527 Y_RNA.240-201ENST00000364469 95 ntBASIC1.69□□□□□ -2.14
KRT9P35527 Y_RNA.267-201ENST00000364679 109 ntBASIC1.69□□□□□ -2.14
KRT9P35527 MIR562-201ENST00000384894 95 ntBASIC1.69□□□□□ -2.14
KRT9P35527 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
KRT9P35527 AL031003.1-201ENST00000404229 172 ntBASIC1.69□□□□□ -2.14
KRT9P35527 PGBD4P5-201ENST00000445958 426 ntBASIC1.69□□□□□ -2.14
KRT9P35527 AC074198.2-201ENST00000508153 258 ntBASIC1.69□□□□□ -2.14
KRT9P35527 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
KRT9P35527 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
KRT9P35527 RNU6-255P-201ENST00000516957 105 ntBASIC1.69□□□□□ -2.14
KRT9P35527 RNU6-341P-201ENST00000516973 96 ntBASIC1.69□□□□□ -2.14
KRT9P35527 RNU6-1212P-201ENST00000517023 104 ntBASIC1.69□□□□□ -2.14
KRT9P35527 SUMO2P16-201ENST00000519475 264 ntBASIC1.69□□□□□ -2.14
KRT9P35527 AC136628.3-201ENST00000521868 290 ntBASIC1.69□□□□□ -2.14
KRT9P35527 MIR5692C2-201ENST00000577959 77 ntBASIC1.69□□□□□ -2.14
KRT9P35527 SNORA28-201ENST00000606769 126 ntBASIC1.69□□□□□ -2.14
KRT9P35527 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRT9P35527 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
KRT9P35527 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.68□□□□□ -2.14
KRT9P35527 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.68□□□□□ -2.14
KRT9P35527 Y_RNA.637-201ENST00000459424 114 ntBASIC1.68□□□□□ -2.14
KRT9P35527 RNU6-406P-201ENST00000516470 107 ntBASIC1.68□□□□□ -2.14
KRT9P35527 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms