Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
PTPN1P18031 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
PTPN1P18031 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTPN1P18031 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
PTPN1P18031 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTPN1P18031 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
PTPN1P18031 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTPN1P18031 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PTPN1P18031 SNORD68-201ENST00000363214 84 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 RNU6-1019P-201ENST00000364424 107 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 MIR518A2-201ENST00000384966 87 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 Y_RNA.584-201ENST00000391090 114 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 RNA5SP465-201ENST00000391195 109 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 MIR1283-2-201ENST00000408621 87 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 RNU2-51P-201ENST00000410708 197 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 RNU6-479P-201ENST00000516348 105 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 RNU6-504P-201ENST00000516568 104 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 AP001328.1-201ENST00000528550 176 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 AC084364.2-201ENST00000546924 395 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 MIR5094-201ENST00000578766 85 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 MIR6766-201ENST00000622641 72 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PTPN1P18031 ZNF658B-202ENST00000615961 3375 ntBASIC2.42□□□□□ -2.02
PTPN1P18031 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTPN1P18031 Y_RNA.66-201ENST00000362862 102 ntBASIC2.41□□□□□ -2.02
PTPN1P18031 MIR539-201ENST00000365690 78 ntBASIC2.41□□□□□ -2.02
PTPN1P18031 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.41□□□□□ -2.02
PTPN1P18031 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.41□□□□□ -2.02
PTPN1P18031 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.41□□□□□ -2.02
PTPN1P18031 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTPN1P18031 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PTPN1P18031 U8.5-201ENST00000364528 136 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 Y_RNA.265-201ENST00000364677 108 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 RNA5SP482-201ENST00000391269 118 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 AC069257.2-201ENST00000441819 155 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 RNU6-1211P-201ENST00000459179 105 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 RNU6-313P-201ENST00000516317 112 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 RNU7-28P-201ENST00000516759 62 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 AC007751.1-201ENST00000529260 376 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 MIR3124-201ENST00000582636 67 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 MIR4762-201ENST00000585261 75 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 AC011603.4-201ENST00000611325 277 ntBASIC2.4□□□□□ -2.03
PTPN1P18031 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.4□□□□□ -2.03
PTPN1P18031 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PTPN1P18031 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
PTPN1P18031 RNU6-915P-201ENST00000364943 103 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 MIR802-201ENST00000390235 94 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 RNU6-1154P-201ENST00000391001 104 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 RNA5SP425-201ENST00000410336 112 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 AL356320.1-201ENST00000429616 163 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 AL365222.1-201ENST00000614661 98 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 MIR8054-201ENST00000620877 86 ntBASIC2.39□□□□□ -2.03
PTPN1P18031 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTPN1P18031 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PTPN1P18031 SNORD50B-201ENST00000364995 70 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 SNORD24-201ENST00000383884 75 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 RNU6-1168P-201ENST00000390831 104 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 RNU6-440P-201ENST00000390882 105 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.38□□□□□ -2.03
PTPN1P18031 AC008267.6-201ENST00000441664 139 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 Y_RNA.666-201ENST00000516187 112 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 AC131055.1-201ENST00000584626 316 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 AL365205.2-201ENST00000594586 68 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 U7.2-201ENST00000607576 63 ntBASIC2.38□□□□□ -2.03
PTPN1P18031 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PTPN1P18031 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN1P18031 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN1P18031 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PTPN1P18031 RNU6-1084P-201ENST00000362498 107 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 U8.2-201ENST00000363156 134 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 Y_RNA.218-201ENST00000364218 104 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 SNORD61-201ENST00000384252 73 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 RN7SKP223-201ENST00000410582 62 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 RNA5SP270-201ENST00000411361 118 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.37□□□□□ -2.03
PTPN1P18031 STAG3L5P-204ENST00000443759 179 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 SNORA18.4-201ENST00000516440 124 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 RNU6-1270P-201ENST00000517128 108 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.37□□□□□ -2.03
PTPN1P18031 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.37□□□□□ -2.03
PTPN1P18031 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN1P18031 Y_RNA.71-201ENST00000362892 104 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 RNU6-888P-201ENST00000363010 101 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 SNORD14E-201ENST00000364009 85 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 snoU2-30.1-201ENST00000365012 70 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 MIR624-201ENST00000385217 97 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PTPN1P18031 RNA5SP127-201ENST00000411051 133 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 SNRPGP13-201ENST00000442212 177 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 RNVU1-2-201ENST00000516326 135 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms