Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 Y_RNA.267-201ENST00000364679 109 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 SNORA4.2-201ENST00000365313 147 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 RNU6-474P-201ENST00000384243 107 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 RNU6-424P-201ENST00000384367 105 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 Y_RNA.551-201ENST00000384661 102 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 MIR215-201ENST00000384858 110 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 MIR653-201ENST00000385279 96 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 RNU6-1009P-201ENST00000390996 107 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 AL390729.2-201ENST00000416137 156 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.59□□□□□ -2.32
COL11A1P12107 RNU6-976P-201ENST00000516086 111 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 RN7SKP295-201ENST00000517264 153 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 AP002004.2-201ENST00000531656 154 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 AC011373.1-201ENST00000607270 237 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 GHRLOS.1-201ENST00000610995 70 ntBASIC0.59□□□□□ -2.32
COL11A1P12107 SNORD68-201ENST00000363214 84 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 SNORA33-201ENST00000363664 130 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 Y_RNA.310-201ENST00000365063 113 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 Y_RNA.356-201ENST00000365475 113 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 Y_RNA.395-201ENST00000383945 109 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 MIR520G-201ENST00000385064 90 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 RNU6-823P-201ENST00000391042 103 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 Y_RNA.592-201ENST00000410274 109 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 RNU6-130P-201ENST00000411112 103 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 PMCHL1-202ENST00000423102 261 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 AC005002.2-201ENST00000438228 269 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 RNU4-77P-201ENST00000516692 156 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 RNU7-4P-201ENST00000516961 62 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.58□□□□□ -2.32
COL11A1P12107 MIR5692C2-201ENST00000577959 77 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 MIR4762-201ENST00000585261 75 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 AC044792.1-201ENST00000593294 196 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 SNORD113-5-201ENST00000607261 78 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 Y_RNA.804-201ENST00000615262 101 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 AC011476.5-201ENST00000615594 130 ntBASIC0.58□□□□□ -2.32
COL11A1P12107 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
COL11A1P12107 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
COL11A1P12107 RNU4-90P-201ENST00000362773 141 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.138-201ENST00000363462 102 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.460-201ENST00000384255 102 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 SNORA53-201ENST00000391141 249 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 U8.16-201ENST00000391279 133 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 MIR548P-201ENST00000408336 84 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU4-30P-201ENST00000410245 143 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 POLR2KP2-201ENST00000438155 177 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.639-201ENST00000458981 102 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU7-12P-201ENST00000516030 62 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-764P-201ENST00000516396 105 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.714-201ENST00000517065 90 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 AC040896.1-201ENST00000613819 479 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 AC012676.2-201ENST00000619258 186 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 AL513423.1-201ENST00000621695 132 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 MIR6759-201ENST00000638110 65 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-1123P-201ENST00000362347 106 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.172-201ENST00000363765 102 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-806P-201ENST00000365147 105 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.439-201ENST00000384119 94 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-1031P-201ENST00000384773 107 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-1248P-201ENST00000391096 64 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU2-61P-201ENST00000411069 191 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 AL162725.1-201ENST00000435405 301 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.57□□□□□ -2.32
COL11A1P12107 HSPE1P25-201ENST00000455484 251 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 OR9P1P-201ENST00000496431 281 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 SEPT14P8-201ENST00000508026 178 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-1338P-201ENST00000516328 91 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU6-63P-201ENST00000516690 95 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RN7SKP88-201ENST00000516847 250 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 RNU7-128P-201ENST00000517247 62 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 AC090049.2-201ENST00000550377 109 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.57□□□□□ -2.32
COL11A1P12107 SNORA28-201ENST00000606769 126 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 7SK.8-201ENST00000612110 250 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 7SK.11-201ENST00000615477 250 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 7SK.13-201ENST00000622040 250 ntBASIC0.57□□□□□ -2.32
COL11A1P12107 Y_RNA.26-201ENST00000362539 101 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-199P-201ENST00000362954 107 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 Y_RNA.124-201ENST00000363339 93 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 SNORA33.2-201ENST00000365413 134 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 Y_RNA.509-201ENST00000384506 99 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNA5SP109-201ENST00000391010 116 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 PIGPP3-201ENST00000425307 415 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU7-34P-201ENST00000459394 64 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-155P-201ENST00000516347 100 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU7-115P-201ENST00000516433 55 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-966P-201ENST00000516479 104 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-1046P-201ENST00000516538 107 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNA5SP168-201ENST00000516642 112 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU7-28P-201ENST00000516759 62 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-1137P-201ENST00000517073 99 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-165P-201ENST00000517170 99 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.56□□□□□ -2.32
COL11A1P12107 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.56□□□□□ -2.32
COL11A1P12107 AL513534.2-201ENST00000603836 250 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 AP003357.1-201ENST00000604497 148 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 AC013791.1-201ENST00000616619 62 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms