Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PF4V1P10720 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PF4V1P10720 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PF4V1P10720 AC005336.3-201ENST00000623833 2679 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PF4V1P10720 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PF4V1P10720 RNA5SP289-201ENST00000362332 137 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 SNORA2.2-201ENST00000365473 135 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 RNU6-1228P-201ENST00000391014 107 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 Y_RNA.587-201ENST00000391210 103 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PF4V1P10720 Z83818.1-201ENST00000603584 150 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 AC078938.1-201ENST00000620993 318 ntBASIC1.89□□□□□ -2.11
PF4V1P10720 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PF4V1P10720 RNU6-457P-201ENST00000363999 107 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 RNU6-1065P-201ENST00000384513 106 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 SNORD72-201ENST00000390994 80 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 RNU2-55P-201ENST00000411146 174 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 Z98742.3-201ENST00000418637 326 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 AC245047.8-201ENST00000456455 284 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 RNU6-322P-201ENST00000516010 103 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 AC106754.2-201ENST00000623006 233 ntBASIC1.88□□□□□ -2.11
PF4V1P10720 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PF4V1P10720 MIR411-201ENST00000362239 96 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 Y_RNA.121-201ENST00000363309 113 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 SNORA67.4-201ENST00000384688 142 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PF4V1P10720 AC027119.1-201ENST00000440877 241 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 snoU13.26-201ENST00000459452 105 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 AC092991.1-201ENST00000477176 376 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 AC026436.1-201ENST00000510537 270 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 AC090049.2-201ENST00000550377 109 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 AC130289.1-201ENST00000577321 73 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 AL513534.2-201ENST00000603836 250 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 Pinc.1-201ENST00000616452 154 ntBASIC1.87□□□□□ -2.11
PF4V1P10720 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PF4V1P10720 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
PF4V1P10720 Y_RNA.7-201ENST00000362352 102 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 Y_RNA.257-201ENST00000364596 102 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 SNORD38C-201ENST00000384381 69 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 MIR15B-201ENST00000385045 98 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 RNU6-493P-201ENST00000391321 108 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 AL606845.1-201ENST00000404881 255 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 SNX2P2-201ENST00000424553 323 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 RNA5SP445-201ENST00000515889 115 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 SCARNA8-201ENST00000515924 131 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 RNY3P16-201ENST00000516338 101 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 RNA5SP281-201ENST00000516504 135 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 MIR3937-201ENST00000580135 106 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 AL365434.2-201ENST00000607979 234 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 AC006441.5-201ENST00000612680 209 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PF4V1P10720 MIR1291-201ENST00000627649 87 ntBASIC1.86□□□□□ -2.11
PF4V1P10720 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
PF4V1P10720 AL442644.1-201ENST00000454390 3105 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 RNU6-923P-201ENST00000364753 107 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 SNORA26-201ENST00000391286 122 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.85□□□□□ -2.11
PF4V1P10720 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.85□□□□□ -2.11
PF4V1P10720 SNRPGP14-201ENST00000435400 219 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 AC015922.2-201ENST00000435593 184 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.85□□□□□ -2.11
PF4V1P10720 RNU6-917P-201ENST00000516294 104 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 RNU6-453P-201ENST00000516819 85 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 CBX3P4-201ENST00000538909 354 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 AC046143.2-201ENST00000609789 160 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 AL137847.3-201ENST00000611521 109 ntBASIC1.85□□□□□ -2.11
PF4V1P10720 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
PF4V1P10720 MIR526A1-201ENST00000384897 85 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 MT-TT-201ENST00000387460 66 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 AL451046.2-201ENST00000403074 277 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.84□□□□□ -2.11
PF4V1P10720 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 AC090142.3-201ENST00000519012 385 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 IGKV3-31-201ENST00000523109 329 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 MIR4744-201ENST00000581563 82 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 MIR7843-201ENST00000622274 79 ntBASIC1.84□□□□□ -2.11
PF4V1P10720 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PF4V1P10720 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PF4V1P10720 RNU6-1020P-201ENST00000363684 107 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 RNU6-268P-201ENST00000364174 107 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 Y_RNA.238-201ENST00000364441 102 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 RNU6-200P-201ENST00000364743 107 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 Y_RNA.435-201ENST00000384095 112 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 Y_RNA.571-201ENST00000384753 98 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 RNU6-1299P-201ENST00000516316 100 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 Y_RNA.700-201ENST00000516806 100 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 RNU6-250P-201ENST00000516958 103 ntBASIC1.83□□□□□ -2.12
PF4V1P10720 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms