Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DOAP06340 Y_RNA.71-201ENST00000362892 104 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 RNA5SP99-201ENST00000364020 114 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 RNU6-978P-201ENST00000364371 103 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 Y_RNA.294-201ENST00000364916 102 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 Y_RNA.432-201ENST00000384087 111 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 RNU6-1168P-201ENST00000390831 104 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 SNORA40.18-201ENST00000391200 128 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 AC099677.2-201ENST00000436385 175 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 AL021397.1-201ENST00000451806 248 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DOAP06340 SNORD77.4-201ENST00000516158 81 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 RNU6-197P-201ENST00000516680 100 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 RNU7-149P-201ENST00000516739 59 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 AC026271.5-201ENST00000577873 130 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 MIR3169-201ENST00000578032 83 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 AC022513.1-201ENST00000624512 117 ntBASIC2.29□□□□□ -2.04
HLA-DOAP06340 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DOAP06340 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DOAP06340 RNU6-508P-201ENST00000363231 103 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 Y_RNA.486-201ENST00000384398 107 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 RNU6-1081P-201ENST00000384537 107 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 MIR562-201ENST00000384894 95 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 SNORD72-201ENST00000390994 80 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 RNU6-735P-201ENST00000410612 107 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 AC010154.1-201ENST00000425857 269 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DOAP06340 AL606517.2-201ENST00000442855 241 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 ATP5J2P3-201ENST00000451550 258 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 RNU6-1299P-201ENST00000516316 100 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 RNU2-56P-201ENST00000516826 190 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DOAP06340 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DOAP06340 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 Pinc.1-201ENST00000616452 154 ntBASIC2.28□□□□□ -2.04
HLA-DOAP06340 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DOAP06340 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
HLA-DOAP06340 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DOAP06340 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DOAP06340 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DOAP06340 RNU6-23P-201ENST00000363283 107 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 Y_RNA.253-201ENST00000364562 112 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 Y_RNA.634-201ENST00000364811 113 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 AL353689.1-201ENST00000438895 199 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 RNU1-131P-201ENST00000458943 161 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 AL163195.1-201ENST00000496941 348 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 RNU6-1146P-201ENST00000516282 102 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DOAP06340 MIR6079-201ENST00000635807 62 ntBASIC2.27□□□□□ -2.05
HLA-DOAP06340 RNA5SP160-201ENST00000364866 120 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 SNORA8-201ENST00000384574 139 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 MIR597-201ENST00000384968 97 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 SNORA79-201ENST00000408376 140 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 RNU2-70P-201ENST00000410718 179 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 RNU6-1333P-201ENST00000516162 93 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 RNU6-313P-201ENST00000516317 112 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 RNU6-479P-201ENST00000516348 105 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 RNU6-62P-201ENST00000516526 102 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 Y_RNA.686-201ENST00000516548 134 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 JPX_2.1-201ENST00000614161 69 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DOAP06340 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
HLA-DOAP06340 SNORA1B-201ENST00000362535 133 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 RNU6-597P-201ENST00000365620 102 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 MIR520G-201ENST00000385064 90 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 SNORA75.5-201ENST00000391291 81 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 MLLT10P1-201ENST00000418346 262 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 RPL23AP63-201ENST00000498752 471 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 MRPS17P9-201ENST00000511924 393 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 RNU1-142P-201ENST00000516682 145 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 MIR3646-201ENST00000578301 84 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 AL049779.4-201ENST00000604500 156 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 AL353149.1-201ENST00000610667 244 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 AC011603.4-201ENST00000611325 277 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 AL591926.4-201ENST00000616895 298 ntBASIC2.25□□□□□ -2.05
HLA-DOAP06340 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HLA-DOAP06340 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DOAP06340 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNU1-58P-201ENST00000362413 163 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 U8.1-201ENST00000362843 134 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNU6-915P-201ENST00000364943 103 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNA5SP323-201ENST00000391094 133 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNU11-3P-201ENST00000391111 133 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNA5SP492-201ENST00000411330 114 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DOAP06340 SNRPGP10-201ENST00000432323 225 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNU7-107P-201ENST00000459121 61 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 MIR2681-201ENST00000581814 105 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.24□□□□□ -2.05
HLA-DOAP06340 RNU6-235P-201ENST00000362644 107 ntBASIC2.23□□□□□ -2.05
HLA-DOAP06340 RNU2-55P-201ENST00000411146 174 ntBASIC2.23□□□□□ -2.05
HLA-DOAP06340 AC003989.2-201ENST00000440224 169 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms