Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 MIR4319-201ENST00000577285 85 ntBASIC2.63□□□□□ -1.99
PRAMEF1O95521 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.63□□□□□ -1.99
PRAMEF1O95521 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PRAMEF1O95521 RNU6-1084P-201ENST00000362498 107 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 SNORA63.4-201ENST00000362763 126 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 Y_RNA.346-201ENST00000365385 112 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 UBBP3-201ENST00000445497 241 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.62□□□□□ -1.99
PRAMEF1O95521 RNU6-113P-201ENST00000516653 101 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 SCARNA15-202ENST00000516881 127 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 MIR5197-201ENST00000583721 112 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 AC022202.1-201ENST00000613515 211 ntBASIC2.62□□□□□ -1.99
PRAMEF1O95521 AC062016.1-201ENST00000355719 319 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 Y_RNA.265-201ENST00000364677 108 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 MIR548A3-201ENST00000385297 97 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.61□□□□□ -1.99
PRAMEF1O95521 RNU7-26P-201ENST00000458980 63 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.61□□□□□ -1.99
PRAMEF1O95521 MIR3126-201ENST00000577443 74 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PRAMEF1O95521 AC069114.2-201ENST00000604699 304 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 AC025166.1-201ENST00000612411 163 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 AC134878.1-201ENST00000619901 243 ntBASIC2.61□□□□□ -1.99
PRAMEF1O95521 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
PRAMEF1O95521 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRAMEF1O95521 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.6□□□□□ -1.99
PRAMEF1O95521 RNU6-755P-201ENST00000364400 103 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 Y_RNA.336-201ENST00000365307 109 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 Y_RNA.410-201ENST00000383992 113 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 RNA5SP109-201ENST00000391010 116 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.6□□□□□ -1.99
PRAMEF1O95521 SNRPGP14-201ENST00000435400 219 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 SNORD45.4-201ENST00000516629 73 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.6□□□□□ -1.99
PRAMEF1O95521 AL121890.5-201ENST00000620848 304 ntBASIC2.6□□□□□ -1.99
PRAMEF1O95521 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
PRAMEF1O95521 MIR449A-201ENST00000362113 91 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 RNU6-268P-201ENST00000364174 107 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 RNU6-1019P-201ENST00000364424 107 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 RNU1-91P-201ENST00000364746 163 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 SNORD116-21-201ENST00000384507 92 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 CYCTP-201ENST00000504253 315 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.59□□□□□ -1.99
PRAMEF1O95521 RNU7-25P-201ENST00000516544 62 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 MIR376A2-201ENST00000636782 80 ntBASIC2.59□□□□□ -1.99
PRAMEF1O95521 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PRAMEF1O95521 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.58□□□□□ -2
PRAMEF1O95521 AC063976.4-201ENST00000421971 163 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 HMGN2P32-201ENST00000444648 269 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 RNA5SP137-201ENST00000516833 135 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 IGKV1-22-201ENST00000524313 326 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 MIR8054-201ENST00000620877 86 ntBASIC2.58□□□□□ -2
PRAMEF1O95521 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
PRAMEF1O95521 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
PRAMEF1O95521 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRAMEF1O95521 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRAMEF1O95521 SNORD115-28-201ENST00000363931 81 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 SNORA22-201ENST00000383907 134 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 RNU6-1189P-201ENST00000383958 107 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 Y_RNA.547-201ENST00000384654 119 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 AC007064.1-201ENST00000412238 351 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.57□□□□□ -2
PRAMEF1O95521 AC069257.2-201ENST00000441819 155 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 STAG3L5P-204ENST00000443759 179 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 AC084364.2-201ENST00000546924 395 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 SNORA28-201ENST00000606769 126 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.57□□□□□ -2
PRAMEF1O95521 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.57□□□□□ -2
PRAMEF1O95521 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRAMEF1O95521 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRAMEF1O95521 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRAMEF1O95521 MTND5P18-201ENST00000445624 1801 ntBASIC2.56□□□□□ -2
PRAMEF1O95521 SNORA38-201ENST00000363946 132 ntBASIC2.56□□□□□ -2
PRAMEF1O95521 RNU6-880P-201ENST00000384526 107 ntBASIC2.56□□□□□ -2
PRAMEF1O95521 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
PRAMEF1O95521 Y_RNA.649-201ENST00000459077 103 ntBASIC2.56□□□□□ -2
PRAMEF1O95521 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.56□□□□□ -2
PRAMEF1O95521 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
PRAMEF1O95521 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.56□□□□□ -2
PRAMEF1O95521 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
PRAMEF1O95521 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRAMEF1O95521 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms