Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU11-2P-201ENST00000516898 142 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 MIR4300-201ENST00000581016 96 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 AC007742.2-201ENST00000618226 398 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 AC138305.3-201ENST00000624988 240 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 U6.92-201ENST00000636464 89 ntBASIC0.43□□□□□ -2.34
SEMA3DO95025 SNORD14E-201ENST00000364009 85 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 RNU6-1175P-201ENST00000365200 107 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 Y_RNA.341-201ENST00000365341 102 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 MIR7-2-201ENST00000384970 110 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 MIR628-201ENST00000385229 95 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 AL590004.1-201ENST00000405321 300 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.42□□□□□ -2.34
SEMA3DO95025 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.42□□□□□ -2.34
SEMA3DO95025 Y_RNA.714-201ENST00000517065 90 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 POLR3GP1-201ENST00000594073 261 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 RBM11P1-201ENST00000604951 799 ntBASIC0.42□□□□□ -2.34
SEMA3DO95025 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.42□□□□□ -2.34
SEMA3DO95025 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SEMA3DO95025 Y_RNA.166-201ENST00000363730 102 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 Y_RNA.203-201ENST00000364106 102 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 Y_RNA.230-201ENST00000364348 109 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 Y_RNA.310-201ENST00000365063 113 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 Y_RNA.393-201ENST00000383936 102 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNY1P8-201ENST00000383970 114 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNU6-1323P-201ENST00000384025 107 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNU6-1067P-201ENST00000384752 107 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 MIR216A-201ENST00000385063 110 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 MT-TL1-201ENST00000386347 75 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNU6-876P-201ENST00000391295 104 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 MIR1827-201ENST00000408549 66 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNA5SP222-201ENST00000411039 105 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 FGF7P6-202ENST00000451282 293 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 U8.19-201ENST00000459095 133 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RNA5SP436-201ENST00000516020 115 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RN7SKP295-201ENST00000517264 153 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 RN7SL793P-201ENST00000583259 296 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 AL136317.1-201ENST00000612653 226 ntBASIC0.41□□□□□ -2.34
SEMA3DO95025 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SEMA3DO95025 MIR559-201ENST00000385188 96 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 SNORD105-201ENST00000386910 85 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 AC005534.2-201ENST00000431047 433 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.4□□□□□ -2.35
SEMA3DO95025 AC091951.2-201ENST00000500762 203 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 RNU6-496P-201ENST00000516145 99 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 RNU6-559P-201ENST00000516151 98 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 AC024405.2-202ENST00000532731 184 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 DEFB117-201ENST00000602356 141 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 AC022306.2-201ENST00000617563 647 ntBASIC0.4□□□□□ -2.35
SEMA3DO95025 Y_RNA.27-201ENST00000362540 103 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 RNU6-1209P-201ENST00000363655 107 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 U8.7-201ENST00000364940 136 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 Y_RNA.474-201ENST00000384341 102 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 SNORD38C-201ENST00000384381 69 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 Y_RNA.570-201ENST00000384750 101 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 MIR936-201ENST00000401264 98 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 RNU6-613P-201ENST00000410412 108 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 RNU6-710P-201ENST00000410424 105 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 SNRPGP14-201ENST00000435400 219 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AC005042.3-201ENST00000453230 174 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 Y_RNA.653-201ENST00000459091 95 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 HMGN1P10-201ENST00000474557 553 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 NDUFA4P2-201ENST00000489989 244 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 RPL23AP54-201ENST00000495129 419 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AL355375.2-201ENST00000574825 175 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AC005730.3-201ENST00000583067 366 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AL355073.2-201ENST00000612106 557 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
SEMA3DO95025 MIR1-1-201ENST00000362147 71 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 SNORD81.1-201ENST00000363064 77 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 U8.17-201ENST00000391292 132 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 MIR1278-201ENST00000408753 81 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 AF228730.4-201ENST00000421457 183 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.38□□□□□ -2.35
SEMA3DO95025 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.38□□□□□ -2.35
SEMA3DO95025 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.38□□□□□ -2.35
SEMA3DO95025 RNU6-229P-201ENST00000516614 102 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 RNU7-116P-201ENST00000516940 62 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 RNU6-699P-201ENST00000517081 110 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 RNU7-181P-201ENST00000517234 74 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 MIR548AO-201ENST00000579992 96 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 AP003357.1-201ENST00000604497 148 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 JPX_2.1-201ENST00000614161 69 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 Pinc.1-201ENST00000616452 154 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 MTND4LP32-201ENST00000636111 270 ntBASIC0.38□□□□□ -2.35
SEMA3DO95025 RNU6-268P-201ENST00000364174 107 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 Y_RNA.331-201ENST00000365267 102 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 RNU6-442P-201ENST00000383968 104 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 Y_RNA.456-201ENST00000384232 111 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 RNY1P4-201ENST00000384595 115 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 MIR802-201ENST00000390235 94 ntBASIC0.37□□□□□ -2.35
SEMA3DO95025 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms