Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DEFB131E-201ENST00000532329 154 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 BNIP3P39-201ENST00000601077 554 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 AL136370.1-201ENST00000608166 691 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 AL391834.2-201ENST00000609982 546 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.82□□□□□ -2.7
LTN1O94822 AL596211.1-201ENST00000569873 2277 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 SNORD115-42-201ENST00000364273 82 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 RNU2-8P-201ENST00000410727 190 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 MTCO2P3-201ENST00000442543 421 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 RNU7-67P-201ENST00000459003 62 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 AC022784.5-201ENST00000522241 437 ntBASIC-1.82□□□□□ -2.7
LTN1O94822 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.82□□□□□ -2.7
LTN1O94822 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.82□□□□□ -2.7
LTN1O94822 RNU6-702P-201ENST00000364982 107 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 AC073464.1-201ENST00000429823 534 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 AC090616.2-202ENST00000584248 222 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 AL354950.2-201ENST00000617939 290 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 MIR382-201ENST00000637119 76 ntBASIC-1.83□□□□□ -2.7
LTN1O94822 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 RNU6-685P-201ENST00000517088 95 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 MTND3P13-201ENST00000574391 343 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 AP000942.4-201ENST00000604811 241 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 AC068880.4-201ENST00000623082 495 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 Z97988.1-201ENST00000637697 135 ntBASIC-1.84□□□□□ -2.7
LTN1O94822 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.85□□□□□ -2.7
LTN1O94822 RNU6-431P-201ENST00000383874 107 ntBASIC-1.85□□□□□ -2.7
LTN1O94822 RNU6-723P-201ENST00000383973 107 ntBASIC-1.85□□□□□ -2.7
LTN1O94822 RNU6-708P-201ENST00000384217 107 ntBASIC-1.85□□□□□ -2.7
LTN1O94822 AL008987.1-201ENST00000415528 237 ntBASIC-1.85□□□□□ -2.7
LTN1O94822 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.85□□□□□ -2.7
LTN1O94822 RNU6-280P-201ENST00000364145 104 ntBASIC-1.85□□□□□ -2.71
LTN1O94822 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.85□□□□□ -2.71
LTN1O94822 RNU6-291P-201ENST00000384720 107 ntBASIC-1.85□□□□□ -2.71
LTN1O94822 AL590002.1-201ENST00000406554 418 ntBASIC-1.85□□□□□ -2.71
LTN1O94822 AC018710.1-201ENST00000506509 158 ntBASIC-1.85□□□□□ -2.71
LTN1O94822 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.85□□□□□ -2.71
LTN1O94822 SNORD114-7-201ENST00000362520 77 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 RNU4-66P-201ENST00000365199 138 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 RNU6-641P-201ENST00000384006 107 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
LTN1O94822 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 MTND3P8-201ENST00000412909 339 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 SNORA25.10-201ENST00000515926 124 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 RNU6-107P-201ENST00000516643 102 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 AP000676.1-201ENST00000533307 52 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 AL512506.1-201ENST00000613918 449 ntBASIC-1.86□□□□□ -2.71
LTN1O94822 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.87□□□□□ -2.71
LTN1O94822 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.87□□□□□ -2.71
LTN1O94822 RNU6-769P-201ENST00000384407 104 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 MIR1284-201ENST00000408337 120 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.87□□□□□ -2.71
LTN1O94822 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 MTND1P24-201ENST00000552175 861 ntBASIC-1.87□□□□□ -2.71
LTN1O94822 RNU6-354P-201ENST00000383862 107 ntBASIC-1.88□□□□□ -2.71
LTN1O94822 RNU6-610P-201ENST00000384264 107 ntBASIC-1.88□□□□□ -2.71
LTN1O94822 MIR487A-201ENST00000385009 80 ntBASIC-1.88□□□□□ -2.71
LTN1O94822 U8.15-201ENST00000390947 134 ntBASIC-1.88□□□□□ -2.71
LTN1O94822 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.88□□□□□ -2.71
LTN1O94822 MTND1P12-201ENST00000455231 147 ntBASIC-1.88□□□□□ -2.71
LTN1O94822 RNU6-434P-201ENST00000384376 107 ntBASIC-1.89□□□□□ -2.71
LTN1O94822 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.89□□□□□ -2.71
LTN1O94822 SNRPGP14-201ENST00000435400 219 ntBASIC-1.89□□□□□ -2.71
LTN1O94822 AL158053.1-201ENST00000441503 453 ntBASIC-1.89□□□□□ -2.71
LTN1O94822 RNU6-437P-201ENST00000459408 95 ntBASIC-1.89□□□□□ -2.71
LTN1O94822 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 RNY4P36-201ENST00000391116 96 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 MTND3P9-201ENST00000429526 346 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 USP9YP30-201ENST00000430729 455 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.9□□□□□ -2.71
LTN1O94822 AC091144.1-201ENST00000519573 138 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 AC022616.4-201ENST00000522985 181 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 MIR4770-201ENST00000579149 58 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 MIR3684-201ENST00000579779 74 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 AC245297.2-201ENST00000610119 565 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 MIR20A-201ENST00000362279 71 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 RNU6-207P-201ENST00000384137 107 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.9□□□□□ -2.71
LTN1O94822 U8.19-201ENST00000459095 133 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 U8.22-201ENST00000459141 133 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 MIR6854-201ENST00000614935 69 ntBASIC-1.9□□□□□ -2.71
LTN1O94822 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.91□□□□□ -2.72
LTN1O94822 SNORD12C-201ENST00000386307 89 ntBASIC-1.91□□□□□ -2.72
LTN1O94822 MTATP6P18-201ENST00000417994 673 ntBASIC-1.91□□□□□ -2.72
LTN1O94822 RPL30P15-201ENST00000457129 321 ntBASIC-1.91□□□□□ -2.72
LTN1O94822 RPL39P5-202ENST00000512505 151 ntBASIC-1.91□□□□□ -2.72
LTN1O94822 AP002371.2-201ENST00000624450 503 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms