Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
BEST1O76090 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
BEST1O76090 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
BEST1O76090 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
BEST1O76090 Y_RNA.148-201ENST00000363557 117 ntBASIC1.14□□□□□ -2.23
BEST1O76090 RNU6-1209P-201ENST00000363655 107 ntBASIC1.14□□□□□ -2.23
BEST1O76090 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
BEST1O76090 Y_RNA.380-201ENST00000365663 111 ntBASIC1.14□□□□□ -2.23
BEST1O76090 SNORA72.4-201ENST00000384174 132 ntBASIC1.14□□□□□ -2.23
BEST1O76090 RNU6-474P-201ENST00000384243 107 ntBASIC1.14□□□□□ -2.23
BEST1O76090 MIR520C-201ENST00000385005 87 ntBASIC1.14□□□□□ -2.23
BEST1O76090 SNORD115-46-201ENST00000390982 71 ntBASIC1.14□□□□□ -2.23
BEST1O76090 SNORA36B-201ENST00000410438 131 ntBASIC1.14□□□□□ -2.23
BEST1O76090 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.14□□□□□ -2.23
BEST1O76090 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
BEST1O76090 RNU7-43P-201ENST00000516554 64 ntBASIC1.14□□□□□ -2.23
BEST1O76090 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
BEST1O76090 AC104695.3-201ENST00000604052 296 ntBASIC1.14□□□□□ -2.23
BEST1O76090 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
BEST1O76090 AL391516.1-201ENST00000554380 2449 ntBASIC1.13□□□□□ -2.23
BEST1O76090 Y_RNA.61-201ENST00000362835 102 ntBASIC1.13□□□□□ -2.23
BEST1O76090 Y_RNA.136-201ENST00000363444 102 ntBASIC1.13□□□□□ -2.23
BEST1O76090 Y_RNA.389-201ENST00000383924 113 ntBASIC1.13□□□□□ -2.23
BEST1O76090 RNU7-141P-201ENST00000459304 62 ntBASIC1.13□□□□□ -2.23
BEST1O76090 RNU6-437P-201ENST00000459408 95 ntBASIC1.13□□□□□ -2.23
BEST1O76090 RNU6-191P-201ENST00000516295 94 ntBASIC1.13□□□□□ -2.23
BEST1O76090 Y_RNA.676-201ENST00000516393 96 ntBASIC1.13□□□□□ -2.23
BEST1O76090 RNU6-897P-201ENST00000517135 105 ntBASIC1.13□□□□□ -2.23
BEST1O76090 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.13□□□□□ -2.23
BEST1O76090 MIR3192-201ENST00000584920 77 ntBASIC1.13□□□□□ -2.23
BEST1O76090 AC134503.1-201ENST00000633048 54 ntBASIC1.13□□□□□ -2.23
BEST1O76090 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
BEST1O76090 AL442644.1-201ENST00000454390 3105 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RNU4-90P-201ENST00000362773 141 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RNU6-801P-201ENST00000364087 105 ntBASIC1.12□□□□□ -2.23
BEST1O76090 Y_RNA.796-201ENST00000364268 102 ntBASIC1.12□□□□□ -2.23
BEST1O76090 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
BEST1O76090 Y_RNA.799-201ENST00000364992 102 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RNU6-442P-201ENST00000383968 104 ntBASIC1.12□□□□□ -2.23
BEST1O76090 SNORD38C-201ENST00000384381 69 ntBASIC1.12□□□□□ -2.23
BEST1O76090 Y_RNA.535-201ENST00000384612 99 ntBASIC1.12□□□□□ -2.23
BEST1O76090 MIR1276-201ENST00000408707 83 ntBASIC1.12□□□□□ -2.23
BEST1O76090 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
BEST1O76090 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.12□□□□□ -2.23
BEST1O76090 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RPS26P48-201ENST00000491713 339 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RNU6-496P-201ENST00000516145 99 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RNU6-397P-201ENST00000516226 104 ntBASIC1.12□□□□□ -2.23
BEST1O76090 RAC1P9-201ENST00000604990 392 ntBASIC1.12□□□□□ -2.23
BEST1O76090 Y_RNA.238-201ENST00000364441 102 ntBASIC1.11□□□□□ -2.23
BEST1O76090 MIR802-201ENST00000390235 94 ntBASIC1.11□□□□□ -2.23
BEST1O76090 RNU7-90P-201ENST00000459216 62 ntBASIC1.11□□□□□ -2.23
BEST1O76090 RNU7-21P-201ENST00000459430 62 ntBASIC1.11□□□□□ -2.23
BEST1O76090 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.11□□□□□ -2.23
BEST1O76090 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.11□□□□□ -2.23
BEST1O76090 SNORA18.7-201ENST00000516910 131 ntBASIC1.11□□□□□ -2.23
BEST1O76090 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.11□□□□□ -2.23
BEST1O76090 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
BEST1O76090 MIR6767-201ENST00000637302 66 ntBASIC1.11□□□□□ -2.23
BEST1O76090 MTND4P29-201ENST00000503122 1372 ntBASIC1.1□□□□□ -2.23
BEST1O76090 RNA5SP264-201ENST00000363115 107 ntBASIC1.1□□□□□ -2.23
BEST1O76090 RNU6-899P-201ENST00000363947 107 ntBASIC1.1□□□□□ -2.23
BEST1O76090 Y_RNA.418-201ENST00000384029 102 ntBASIC1.1□□□□□ -2.23
BEST1O76090 Y_RNA.569-201ENST00000384749 103 ntBASIC1.1□□□□□ -2.23
BEST1O76090 MIR200A-201ENST00000384875 90 ntBASIC1.1□□□□□ -2.23
BEST1O76090 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
BEST1O76090 Y_RNA.602-201ENST00000410535 92 ntBASIC1.1□□□□□ -2.23
BEST1O76090 MTND4LP30-201ENST00000454092 297 ntBASIC1.1□□□□□ -2.23
BEST1O76090 snoU13.25-201ENST00000458945 104 ntBASIC1.1□□□□□ -2.23
BEST1O76090 SNORD123-201ENST00000459473 70 ntBASIC1.1□□□□□ -2.23
BEST1O76090 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
BEST1O76090 AC008163.1-202ENST00000636004 2889 ntBASIC1.09□□□□□ -2.23
BEST1O76090 RNU6-450P-201ENST00000364654 107 ntBASIC1.09□□□□□ -2.23
BEST1O76090 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
BEST1O76090 RNU6-144P-201ENST00000383951 107 ntBASIC1.09□□□□□ -2.23
BEST1O76090 RNU2-14P-201ENST00000411053 191 ntBASIC1.09□□□□□ -2.23
BEST1O76090 HSPE1P25-201ENST00000455484 251 ntBASIC1.09□□□□□ -2.23
BEST1O76090 RNU6-830P-201ENST00000516353 107 ntBASIC1.09□□□□□ -2.23
BEST1O76090 SNORA40.15-201ENST00000516884 107 ntBASIC1.09□□□□□ -2.23
BEST1O76090 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.09□□□□□ -2.23
BEST1O76090 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
BEST1O76090 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.09□□□□□ -2.23
BEST1O76090 RNA5SP48-201ENST00000363969 126 ntBASIC1.08□□□□□ -2.24
BEST1O76090 RNU6-1048P-201ENST00000364054 107 ntBASIC1.08□□□□□ -2.24
BEST1O76090 Y_RNA.581-201ENST00000391017 97 ntBASIC1.08□□□□□ -2.24
BEST1O76090 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
BEST1O76090 SNORA26.5-201ENST00000391215 123 ntBASIC1.08□□□□□ -2.24
BEST1O76090 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
BEST1O76090 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.08□□□□□ -2.24
BEST1O76090 NDUFA4P2-201ENST00000489989 244 ntBASIC1.08□□□□□ -2.24
BEST1O76090 RNU6-764P-201ENST00000516396 105 ntBASIC1.08□□□□□ -2.24
BEST1O76090 AP003716.2-201ENST00000528260 108 ntBASIC1.08□□□□□ -2.24
BEST1O76090 RPL23AP91-201ENST00000569211 455 ntBASIC1.08□□□□□ -2.24
BEST1O76090 AC008507.4-201ENST00000585464 127 ntBASIC1.08□□□□□ -2.24
BEST1O76090 AC005357.1-201ENST00000588399 301 ntBASIC1.08□□□□□ -2.24
BEST1O76090 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
BEST1O76090 Y_RNA.158-201ENST00000363651 101 ntBASIC1.07□□□□□ -2.24
BEST1O76090 RNU6-102P-201ENST00000384485 104 ntBASIC1.07□□□□□ -2.24
BEST1O76090 MIR548P-201ENST00000408336 84 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms