Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR2681-201ENST00000581814 105 ntBASIC2.28□□□□□ -2.04
CDKL5O76039 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.28□□□□□ -2.04
CDKL5O76039 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
CDKL5O76039 AL365222.1-201ENST00000614661 98 ntBASIC2.28□□□□□ -2.04
CDKL5O76039 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.28□□□□□ -2.05
CDKL5O76039 Y_RNA.91-201ENST00000363042 107 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 Y_RNA.542-201ENST00000384641 111 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 Y_RNA.621-201ENST00000411065 96 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 RNU2-55P-201ENST00000411146 174 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 RNU6-1299P-201ENST00000516316 100 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 MIR4648-201ENST00000580107 72 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.27□□□□□ -2.05
CDKL5O76039 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDKL5O76039 Y_RNA.218-201ENST00000364218 104 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 RNU6-978P-201ENST00000364371 103 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 RNU6-597P-201ENST00000365620 102 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 SNORA75.5-201ENST00000391291 81 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 MIR1261-201ENST00000408659 82 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 AC233266.1-201ENST00000454518 96 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 RNU1-41P-201ENST00000516161 162 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 RNU6-479P-201ENST00000516348 105 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 RNU1-48P-201ENST00000516400 162 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 AC242852.1-201ENST00000612151 96 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 JPX_2.1-201ENST00000614161 69 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 AC244015.1-201ENST00000622301 99 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 MIR6079-201ENST00000635807 62 ntBASIC2.26□□□□□ -2.05
CDKL5O76039 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CDKL5O76039 AC018630.2-201ENST00000534866 2403 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNA5SP493-201ENST00000364115 91 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNU6-1164P-201ENST00000364428 107 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 Y_RNA.251-201ENST00000364551 99 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 Y_RNA.253-201ENST00000364562 112 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 Y_RNA.267-201ENST00000364679 109 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 SNORA22C-201ENST00000384614 134 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNU6-1168P-201ENST00000390831 104 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNU6-1154P-201ENST00000391001 104 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.25□□□□□ -2.05
CDKL5O76039 NDUFA4P2-201ENST00000489989 244 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNU6-62P-201ENST00000516526 102 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNU7-149P-201ENST00000516739 59 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 RNA5SP364-201ENST00000516938 78 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 AL160236.1-201ENST00000556317 195 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.25□□□□□ -2.05
CDKL5O76039 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
CDKL5O76039 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
CDKL5O76039 AC080100.1-201ENST00000624239 5356 ntBASIC2.25□□□□□ -2.05
CDKL5O76039 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDKL5O76039 RNU6-862P-201ENST00000362804 105 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 Y_RNA.634-201ENST00000364811 113 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 RNU2-70P-201ENST00000410718 179 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.24□□□□□ -2.05
CDKL5O76039 AC023449.1-201ENST00000454464 154 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 RNU6-313P-201ENST00000516317 112 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 RNU1-142P-201ENST00000516682 145 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 MIR3169-201ENST00000578032 83 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 MIR3935-201ENST00000583472 104 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 AC097639.2-201ENST00000603159 172 ntBASIC2.24□□□□□ -2.05
CDKL5O76039 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
CDKL5O76039 SNORA8-201ENST00000384574 139 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 SNORA12.1-201ENST00000390873 148 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 RNA5SP323-201ENST00000391094 133 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 AC099677.2-201ENST00000436385 175 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.23□□□□□ -2.05
CDKL5O76039 RNU6-1211P-201ENST00000459179 105 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 RPS26P45-201ENST00000471748 340 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 HMGN1P7-201ENST00000491722 313 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 RNA5SP153-201ENST00000516498 76 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 RNU6-341P-201ENST00000516973 96 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 Pinc.1-201ENST00000616452 154 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 AC022513.1-201ENST00000624512 117 ntBASIC2.23□□□□□ -2.05
CDKL5O76039 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
CDKL5O76039 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDKL5O76039 RNU6-23P-201ENST00000363283 107 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 Y_RNA.261-201ENST00000364631 102 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 RNU6-1138P-201ENST00000365359 106 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 Y_RNA.486-201ENST00000384398 107 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 AC019129.1-201ENST00000403786 261 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 CST2P1-201ENST00000425770 87 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 OR9P1P-201ENST00000496431 281 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 AL163195.1-201ENST00000496941 348 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 RNU7-193P-201ENST00000516723 65 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 RNU6-1234P-201ENST00000516877 103 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.22□□□□□ -2.05
CDKL5O76039 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.22□□□□□ -2.05
CDKL5O76039 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CDKL5O76039 SNORA1B-201ENST00000362535 133 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 Y_RNA.71-201ENST00000362892 104 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 RNU6-1290P-201ENST00000362957 109 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 RNU6-735P-201ENST00000410612 107 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 SNRPGP10-201ENST00000432323 225 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 AC245047.4-201ENST00000433189 144 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 AC008267.6-201ENST00000441664 139 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.21□□□□□ -2.06
CDKL5O76039 MRPS17P9-201ENST00000511924 393 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 AC090142.3-201ENST00000519012 385 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms