Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-862P-201ENST00000362804 105 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 SNORA33-201ENST00000363664 130 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 Y_RNA.242-201ENST00000364473 110 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 Y_RNA.267-201ENST00000364679 109 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 RN7SKP192-201ENST00000411291 327 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 AC099677.2-201ENST00000436385 175 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.69□□□□□ -1.98
VAMP4O75379 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.69□□□□□ -1.98
VAMP4O75379 RNU6-971P-201ENST00000516920 106 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 Y_RNA.714-201ENST00000517065 90 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 RNU6-365P-201ENST00000517113 106 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 AP001328.1-201ENST00000528550 176 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 AP002004.2-201ENST00000531656 154 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 AC087685.1-201ENST00000587507 141 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 AL365222.1-201ENST00000614661 98 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAMP4O75379 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
VAMP4O75379 Y_RNA.71-201ENST00000362892 104 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 Y_RNA.91-201ENST00000363042 107 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 U8.2-201ENST00000363156 134 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 Y_RNA.218-201ENST00000364218 104 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 Y_RNA.486-201ENST00000384398 107 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 SNORA22C-201ENST00000384614 134 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 RNU6-460P-201ENST00000391158 108 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 AL445646.1-201ENST00000431784 216 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 AC090142.3-201ENST00000519012 385 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 AC121758.2-201ENST00000553271 193 ntBASIC2.68□□□□□ -1.98
VAMP4O75379 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.68□□□□□ -1.98
VAMP4O75379 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.68□□□□□ -1.98
VAMP4O75379 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VAMP4O75379 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VAMP4O75379 Y_RNA.66-201ENST00000362862 102 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 RNU6-23P-201ENST00000363283 107 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 Y_RNA.127-201ENST00000363386 109 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 RNY1P11-201ENST00000363759 113 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 SNORA3A-201ENST00000364113 130 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 RNU6-80P-201ENST00000384195 107 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 RNU1-148P-201ENST00000384472 162 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VAMP4O75379 Y_RNA.584-201ENST00000391090 114 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 RNA5SP270-201ENST00000411361 118 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 RNU6-1211P-201ENST00000459179 105 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 AL049830.1-201ENST00000468034 425 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 IGLV3-17-201ENST00000519099 244 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.67□□□□□ -1.98
VAMP4O75379 AC005786.1-201ENST00000588553 154 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 U7.2-201ENST00000607576 63 ntBASIC2.67□□□□□ -1.98
VAMP4O75379 MIRLET7G-201ENST00000362280 84 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 RNU1-58P-201ENST00000362413 163 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 RNA5SP205-201ENST00000364653 136 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 FTH1P12-201ENST00000432137 551 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 RNU6-504P-201ENST00000516568 104 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 RNA5SP137-201ENST00000516833 135 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 MIR3126-201ENST00000577443 74 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 AC008507.4-201ENST00000585464 127 ntBASIC2.66□□□□□ -1.98
VAMP4O75379 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VAMP4O75379 SNORA1B-201ENST00000362535 133 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 SNORD116-14-201ENST00000383894 92 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 SNORD116-17-201ENST00000383929 92 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 SNORD116-15-201ENST00000384445 92 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 SNORD116-19-201ENST00000384729 92 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 SNORD23.1-201ENST00000408212 104 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.65□□□□□ -1.99
VAMP4O75379 MRPS17P9-201ENST00000511924 393 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 RNU2-56P-201ENST00000516826 190 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 AC131055.1-201ENST00000584626 316 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 AL591926.4-201ENST00000616895 298 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 AC022513.1-201ENST00000624512 117 ntBASIC2.65□□□□□ -1.99
VAMP4O75379 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.65□□□□□ -1.99
VAMP4O75379 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VAMP4O75379 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VAMP4O75379 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
VAMP4O75379 MIR126-201ENST00000362291 85 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 RNU6-1290P-201ENST00000362957 109 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 RNU6-915P-201ENST00000364943 103 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 SNORD50B-201ENST00000364995 70 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 MIR144-201ENST00000384886 86 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 MIR522-201ENST00000385071 87 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.64□□□□□ -1.99
VAMP4O75379 MIR4762-201ENST00000585261 75 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 AL365205.2-201ENST00000594586 68 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 AC011603.4-201ENST00000611325 277 ntBASIC2.64□□□□□ -1.99
VAMP4O75379 Y_RNA.120-201ENST00000363304 110 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 MIR624-201ENST00000385217 97 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 Y_RNA.629-201ENST00000411368 105 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 CYCSP49-201ENST00000420810 319 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.63□□□□□ -1.99
VAMP4O75379 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.63□□□□□ -1.99
VAMP4O75379 RNU4-57P-201ENST00000515980 135 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 MIR5089-201ENST00000580047 84 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 AC022202.1-201ENST00000613515 211 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 Y_RNA.783-201ENST00000613546 102 ntBASIC2.63□□□□□ -1.99
VAMP4O75379 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
VAMP4O75379 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAMP4O75379 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VAMP4O75379 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 RNA5SP160-201ENST00000364866 120 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 RNU6-1336P-201ENST00000383886 109 ntBASIC2.62□□□□□ -1.99
VAMP4O75379 SNORA12.1-201ENST00000390873 148 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms