Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF40O75150 AC103810.7-201ENST00000607821 91 ntBASIC3.76□□□□□ -1.81
RNF40O75150 MIR5739-201ENST00000619803 80 ntBASIC3.76□□□□□ -1.81
RNF40O75150 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RNF40O75150 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF40O75150 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF40O75150 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF40O75150 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF40O75150 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RNF40O75150 MFSD8-233ENST00000641482 4860 ntBASIC3.76□□□□□ -1.81
RNF40O75150 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF40O75150 SNORD114-6-201ENST00000364393 72 ntBASIC3.75□□□□□ -1.81
RNF40O75150 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF40O75150 CST2P1-201ENST00000425770 87 ntBASIC3.75□□□□□ -1.81
RNF40O75150 CYCSP4-201ENST00000429682 331 ntBASIC3.75□□□□□ -1.81
RNF40O75150 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF40O75150 RN7SL601P-201ENST00000471221 293 ntBASIC3.75□□□□□ -1.81
RNF40O75150 RN7SL636P-201ENST00000497504 294 ntBASIC3.75□□□□□ -1.81
RNF40O75150 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.75□□□□□ -1.81
RNF40O75150 XIST_intron.1-201ENST00000619444 68 ntBASIC3.75□□□□□ -1.81
RNF40O75150 UCA1.1-201ENST00000620952 75 ntBASIC3.75□□□□□ -1.81
RNF40O75150 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF40O75150 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF40O75150 Y_RNA.140-201ENST00000363474 103 ntBASIC3.74□□□□□ -1.81
RNF40O75150 SNORA25.6-201ENST00000364121 118 ntBASIC3.74□□□□□ -1.81
RNF40O75150 SNORD115-27-201ENST00000364430 82 ntBASIC3.74□□□□□ -1.81
RNF40O75150 RNU6-1163P-201ENST00000364516 107 ntBASIC3.74□□□□□ -1.81
RNF40O75150 MIR218-1-201ENST00000384999 110 ntBASIC3.74□□□□□ -1.81
RNF40O75150 RNA5SP424-201ENST00000390988 115 ntBASIC3.74□□□□□ -1.81
RNF40O75150 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF40O75150 RN7SL297P-201ENST00000483161 293 ntBASIC3.74□□□□□ -1.81
RNF40O75150 RN7SL504P-201ENST00000494496 287 ntBASIC3.74□□□□□ -1.81
RNF40O75150 UBL5P1-201ENST00000507979 193 ntBASIC3.74□□□□□ -1.81
RNF40O75150 RPPH1-2P-201ENST00000516688 293 ntBASIC3.74□□□□□ -1.81
RNF40O75150 MIR2276-201ENST00000516886 89 ntBASIC3.74□□□□□ -1.81
RNF40O75150 MIR3199-1-201ENST00000582434 88 ntBASIC3.74□□□□□ -1.81
RNF40O75150 MIR8058-201ENST00000615737 89 ntBASIC3.74□□□□□ -1.81
RNF40O75150 SEPT14P17-201ENST00000617978 177 ntBASIC3.74□□□□□ -1.81
RNF40O75150 MIR3651-201ENST00000630427 90 ntBASIC3.74□□□□□ -1.81
RNF40O75150 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF40O75150 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
RNF40O75150 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RNF40O75150 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF40O75150 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RNF40O75150 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF40O75150 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF40O75150 MIRLET7C-201ENST00000362160 84 ntBASIC3.73□□□□□ -1.81
RNF40O75150 SNORA26.6-201ENST00000391256 115 ntBASIC3.73□□□□□ -1.81
RNF40O75150 NDUFB4P4-201ENST00000404822 243 ntBASIC3.73□□□□□ -1.81
RNF40O75150 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.73□□□□□ -1.81
RNF40O75150 AC018868.1-201ENST00000491307 315 ntBASIC3.73□□□□□ -1.81
RNF40O75150 AC114811.1-201ENST00000507207 168 ntBASIC3.73□□□□□ -1.81
RNF40O75150 IGLV3-17-201ENST00000519099 244 ntBASIC3.73□□□□□ -1.81
RNF40O75150 AL512310.12-203ENST00000640543 90 ntBASIC3.73□□□□□ -1.81
RNF40O75150 SNORA22.1-201ENST00000362701 134 ntBASIC3.72□□□□□ -1.81
RNF40O75150 Y_RNA.565-201ENST00000384719 101 ntBASIC3.72□□□□□ -1.81
RNF40O75150 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF40O75150 RNA5SP33-201ENST00000516687 98 ntBASIC3.72□□□□□ -1.81
RNF40O75150 RNU7-28P-201ENST00000516759 62 ntBASIC3.72□□□□□ -1.81
RNF40O75150 AC005000.2-201ENST00000605468 310 ntBASIC3.72□□□□□ -1.81
RNF40O75150 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
RNF40O75150 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
RNF40O75150 AC091152.2-201ENST00000591628 2569 ntBASIC3.71□□□□□ -1.81
RNF40O75150 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RNF40O75150 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF40O75150 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF40O75150 Y_RNA.609-201ENST00000410669 89 ntBASIC3.71□□□□□ -1.82
RNF40O75150 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF40O75150 HMGN1P18-201ENST00000457642 277 ntBASIC3.71□□□□□ -1.82
RNF40O75150 SNORA70.18-201ENST00000516696 98 ntBASIC3.71□□□□□ -1.82
RNF40O75150 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF40O75150 AC104027.1-201ENST00000521887 300 ntBASIC3.71□□□□□ -1.82
RNF40O75150 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF40O75150 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF40O75150 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RNF40O75150 AC007336.1-201ENST00000576365 3828 ntBASIC3.71□□□□□ -1.82
RNF40O75150 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF40O75150 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF40O75150 AL035425.3-201ENST00000564206 4996 ntBASIC3.7□□□□□ -1.82
RNF40O75150 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF40O75150 RNU6-1244P-201ENST00000363614 108 ntBASIC3.7□□□□□ -1.82
RNF40O75150 RNU1-33P-201ENST00000364249 162 ntBASIC3.7□□□□□ -1.82
RNF40O75150 AC245047.3-201ENST00000429428 127 ntBASIC3.7□□□□□ -1.82
RNF40O75150 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF40O75150 CYP2C59P-201ENST00000457790 269 ntBASIC3.7□□□□□ -1.82
RNF40O75150 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF40O75150 AC145423.2-201ENST00000610631 239 ntBASIC3.7□□□□□ -1.82
RNF40O75150 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF40O75150 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF40O75150 Y_RNA.99-201ENST00000363138 105 ntBASIC3.69□□□□□ -1.82
RNF40O75150 AL445685.2-201ENST00000422551 342 ntBASIC3.69□□□□□ -1.82
RNF40O75150 SNORA64.4-201ENST00000516632 81 ntBASIC3.69□□□□□ -1.82
RNF40O75150 RNU6-1116P-201ENST00000517269 99 ntBASIC3.69□□□□□ -1.82
RNF40O75150 AC007536.1-201ENST00000533382 349 ntBASIC3.69□□□□□ -1.82
RNF40O75150 RNU6-86P-201ENST00000606534 107 ntBASIC3.69□□□□□ -1.82
RNF40O75150 MIR7851-201ENST00000610611 160 ntBASIC3.69□□□□□ -1.82
RNF40O75150 AC027279.3-201ENST00000625055 122 ntBASIC3.69□□□□□ -1.82
RNF40O75150 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF40O75150 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF40O75150 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms