Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6-1189P-201ENST00000383958 107 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 MIR34B-201ENST00000385076 84 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6-816P-201ENST00000390914 107 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6-220P-201ENST00000390919 107 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6-1268P-201ENST00000391214 107 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 SNORA48.7-201ENST00000391302 135 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6-1239P-201ENST00000391310 107 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 AL138827.1-201ENST00000402666 306 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RN7SKP27-201ENST00000410684 333 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 AC009238.1-201ENST00000442165 424 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 AC009237.6-201ENST00000446969 424 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 HMGN2P18-201ENST00000450680 270 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 AC233266.1-201ENST00000454518 96 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RPL39P39-201ENST00000455840 151 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 RNU6-1291P-201ENST00000516591 104 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM13O60858 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM13O60858 AC242852.1-201ENST00000612151 96 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM13O60858 AC244015.1-201ENST00000622301 99 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 MIR1248-201ENST00000629190 106 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
TRIM13O60858 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM13O60858 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM13O60858 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
TRIM13O60858 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM13O60858 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM13O60858 Y_RNA.221-201ENST00000364248 96 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 MIR1253-201ENST00000408273 105 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 MIR548O-201ENST00000408583 114 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 Y_RNA.601-201ENST00000410500 113 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 AL139132.1-201ENST00000431587 344 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 BX510359.1-201ENST00000456973 237 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM13O60858 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM13O60858 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 RNU6-965P-201ENST00000516721 96 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 RNU6-856P-201ENST00000516959 98 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 RNA5SP490-201ENST00000517141 136 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 RNU7-128P-201ENST00000517247 62 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM13O60858 MIR1254-2-201ENST00000579553 63 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 AL355297.2-201ENST00000604792 129 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
TRIM13O60858 AC018630.2-201ENST00000534866 2403 ntBASIC2.6□□□□□ -1.99
TRIM13O60858 RNU6-1099P-201ENST00000363533 107 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 SNORA33-201ENST00000363664 130 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 RNY1P1-201ENST00000364372 112 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 Y_RNA.244-201ENST00000364484 109 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 MIR670-201ENST00000390142 98 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 RNA5SP21-201ENST00000410917 96 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 HMGN2P35-201ENST00000412164 270 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 RNU2-13P-201ENST00000515909 113 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 AL359075.3-201ENST00000613288 217 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 AL449363.1-201ENST00000617815 186 ntBASIC2.59□□□□□ -1.99
TRIM13O60858 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM13O60858 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -2
TRIM13O60858 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM13O60858 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
TRIM13O60858 MIR126-201ENST00000362291 85 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNU1-23P-201ENST00000363361 144 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNU1-133P-201ENST00000364867 167 ntBASIC2.58□□□□□ -2
TRIM13O60858 SNORA4.2-201ENST00000365313 147 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNU6-1276P-201ENST00000365372 104 ntBASIC2.58□□□□□ -2
TRIM13O60858 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM13O60858 RNU6-1186P-201ENST00000410429 97 ntBASIC2.58□□□□□ -2
TRIM13O60858 AC096949.1-201ENST00000412047 152 ntBASIC2.58□□□□□ -2
TRIM13O60858 AC003685.2-201ENST00000422795 395 ntBASIC2.58□□□□□ -2
TRIM13O60858 FTH1P12-201ENST00000432137 551 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNU7-61P-201ENST00000515897 61 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNA5SP341-201ENST00000516261 117 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNU7-99P-201ENST00000516271 62 ntBASIC2.58□□□□□ -2
TRIM13O60858 RNU6-521P-201ENST00000516663 105 ntBASIC2.58□□□□□ -2
TRIM13O60858 AL358944.1-201ENST00000528537 144 ntBASIC2.58□□□□□ -2
TRIM13O60858 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.58□□□□□ -2
TRIM13O60858 AC022254.1-201ENST00000567857 235 ntBASIC2.58□□□□□ -2
TRIM13O60858 MIR3683-201ENST00000580847 82 ntBASIC2.58□□□□□ -2
TRIM13O60858 MIR4305-201ENST00000583252 102 ntBASIC2.58□□□□□ -2
TRIM13O60858 AC022217.4-201ENST00000604389 163 ntBASIC2.58□□□□□ -2
TRIM13O60858 AC006441.5-201ENST00000612680 209 ntBASIC2.58□□□□□ -2
TRIM13O60858 IGLL4P-201ENST00000614590 133 ntBASIC2.58□□□□□ -2
TRIM13O60858 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
TRIM13O60858 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.58□□□□□ -2
TRIM13O60858 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM13O60858 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.58□□□□□ -2
TRIM13O60858 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM13O60858 Y_RNA.10-201ENST00000362371 110 ntBASIC2.57□□□□□ -2
TRIM13O60858 Y_RNA.37-201ENST00000362606 108 ntBASIC2.57□□□□□ -2
TRIM13O60858 Y_RNA.73-201ENST00000362910 113 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU6-497P-201ENST00000365316 104 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU6-787P-201ENST00000384032 107 ntBASIC2.57□□□□□ -2
TRIM13O60858 RNU6-242P-201ENST00000384359 107 ntBASIC2.57□□□□□ -2
TRIM13O60858 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
TRIM13O60858 MIR522-201ENST00000385071 87 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms