Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 MIR424-201ENST00000362227 98 ntBASIC1.94□□□□□ -2.1
SNX2O60749 RNU4-17P-201ENST00000365598 141 ntBASIC1.94□□□□□ -2.1
SNX2O60749 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.94□□□□□ -2.1
SNX2O60749 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX2O60749 AC245047.8-201ENST00000456455 284 ntBASIC1.94□□□□□ -2.1
SNX2O60749 HMGN1P7-201ENST00000491722 313 ntBASIC1.94□□□□□ -2.1
SNX2O60749 OR9P1P-201ENST00000496431 281 ntBASIC1.94□□□□□ -2.1
SNX2O60749 MIR3668-201ENST00000582138 75 ntBASIC1.94□□□□□ -2.1
SNX2O60749 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX2O60749 MIR126-201ENST00000362291 85 ntBASIC1.93□□□□□ -2.1
SNX2O60749 SNORD68-201ENST00000363214 84 ntBASIC1.93□□□□□ -2.1
SNX2O60749 RNU6-439P-201ENST00000384188 106 ntBASIC1.93□□□□□ -2.1
SNX2O60749 RNU6-1031P-201ENST00000384773 107 ntBASIC1.93□□□□□ -2.1
SNX2O60749 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.93□□□□□ -2.1
SNX2O60749 RN7SKP101-201ENST00000411376 320 ntBASIC1.93□□□□□ -2.1
SNX2O60749 MLLT10P1-201ENST00000418346 262 ntBASIC1.93□□□□□ -2.1
SNX2O60749 JTBP1-201ENST00000441314 247 ntBASIC1.93□□□□□ -2.1
SNX2O60749 SNORD11-201ENST00000459124 84 ntBASIC1.93□□□□□ -2.1
SNX2O60749 snoU13.27-201ENST00000459278 104 ntBASIC1.93□□□□□ -2.1
SNX2O60749 RNU7-34P-201ENST00000459394 64 ntBASIC1.93□□□□□ -2.1
SNX2O60749 NDUFA4P2-201ENST00000489989 244 ntBASIC1.93□□□□□ -2.1
SNX2O60749 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX2O60749 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
SNX2O60749 SNORA81.3-201ENST00000517283 198 ntBASIC1.93□□□□□ -2.1
SNX2O60749 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
SNX2O60749 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
SNX2O60749 RNU2-4P-201ENST00000606190 192 ntBASIC1.93□□□□□ -2.1
SNX2O60749 AL021707.8-201ENST00000609428 183 ntBASIC1.93□□□□□ -2.1
SNX2O60749 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SNX2O60749 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNX2O60749 RNU6-1020P-201ENST00000363684 107 ntBASIC1.92□□□□□ -2.1
SNX2O60749 MIR522-201ENST00000385071 87 ntBASIC1.92□□□□□ -2.1
SNX2O60749 RN7SKP200-201ENST00000410564 320 ntBASIC1.92□□□□□ -2.1
SNX2O60749 Y_RNA.793-201ENST00000411222 111 ntBASIC1.92□□□□□ -2.1
SNX2O60749 SNRPGP10-201ENST00000432323 225 ntBASIC1.92□□□□□ -2.1
SNX2O60749 AC099513.1-201ENST00000490423 301 ntBASIC1.92□□□□□ -2.1
SNX2O60749 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
SNX2O60749 RNU6-1116P-201ENST00000517269 99 ntBASIC1.92□□□□□ -2.1
SNX2O60749 MIR4709-201ENST00000577272 72 ntBASIC1.92□□□□□ -2.1
SNX2O60749 MIR5688-201ENST00000580619 83 ntBASIC1.92□□□□□ -2.1
SNX2O60749 MIR4285-201ENST00000581001 85 ntBASIC1.92□□□□□ -2.1
SNX2O60749 MIR4422-201ENST00000581938 83 ntBASIC1.92□□□□□ -2.1
SNX2O60749 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX2O60749 AL049861.1-201ENST00000603130 150 ntBASIC1.92□□□□□ -2.1
SNX2O60749 Z83818.1-201ENST00000603584 150 ntBASIC1.92□□□□□ -2.1
SNX2O60749 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
SNX2O60749 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNX2O60749 Y_RNA.29-201ENST00000362570 113 ntBASIC1.91□□□□□ -2.1
SNX2O60749 Y_RNA.785-201ENST00000384290 109 ntBASIC1.91□□□□□ -2.1
SNX2O60749 Y_RNA.571-201ENST00000384753 98 ntBASIC1.91□□□□□ -2.1
SNX2O60749 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
SNX2O60749 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
SNX2O60749 RNA5SP482-201ENST00000391269 118 ntBASIC1.91□□□□□ -2.1
SNX2O60749 CALM2P4-201ENST00000430810 426 ntBASIC1.91□□□□□ -2.1
SNX2O60749 AL138752.1-201ENST00000452964 351 ntBASIC1.91□□□□□ -2.1
SNX2O60749 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.91□□□□□ -2.1
SNX2O60749 MIR2681-201ENST00000581814 105 ntBASIC1.91□□□□□ -2.1
SNX2O60749 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.91□□□□□ -2.1
SNX2O60749 AC021506.2-201ENST00000612354 169 ntBASIC1.91□□□□□ -2.1
SNX2O60749 JPX_2.1-201ENST00000614161 69 ntBASIC1.91□□□□□ -2.1
SNX2O60749 AC004792.1-201ENST00000614523 137 ntBASIC1.91□□□□□ -2.1
SNX2O60749 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
SNX2O60749 MIRLET7C-201ENST00000362160 84 ntBASIC1.9□□□□□ -2.11
SNX2O60749 Y_RNA.7-201ENST00000362352 102 ntBASIC1.9□□□□□ -2.11
SNX2O60749 Y_RNA.238-201ENST00000364441 102 ntBASIC1.9□□□□□ -2.11
SNX2O60749 RNU6-203P-201ENST00000384038 104 ntBASIC1.9□□□□□ -2.11
SNX2O60749 MIR616-201ENST00000385293 97 ntBASIC1.9□□□□□ -2.11
SNX2O60749 Y_RNA.587-201ENST00000391210 103 ntBASIC1.9□□□□□ -2.11
SNX2O60749 RNA5SP496-201ENST00000391240 109 ntBASIC1.9□□□□□ -2.11
SNX2O60749 U8.16-201ENST00000391279 133 ntBASIC1.9□□□□□ -2.11
SNX2O60749 AL034345.1-201ENST00000407768 123 ntBASIC1.9□□□□□ -2.11
SNX2O60749 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.9□□□□□ -2.11
SNX2O60749 AL591806.2-201ENST00000433122 173 ntBASIC1.9□□□□□ -2.11
SNX2O60749 RNU6-561P-201ENST00000516222 102 ntBASIC1.9□□□□□ -2.11
SNX2O60749 RNU7-28P-201ENST00000516759 62 ntBASIC1.9□□□□□ -2.11
SNX2O60749 Y_RNA.700-201ENST00000516806 100 ntBASIC1.9□□□□□ -2.11
SNX2O60749 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.9□□□□□ -2.11
SNX2O60749 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.9□□□□□ -2.11
SNX2O60749 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
SNX2O60749 AC095038.3-201ENST00000634439 195 ntBASIC1.9□□□□□ -2.11
SNX2O60749 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SNX2O60749 RNU6-950P-201ENST00000384651 107 ntBASIC1.89□□□□□ -2.11
SNX2O60749 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
SNX2O60749 RN7SKP51-201ENST00000410781 304 ntBASIC1.89□□□□□ -2.11
SNX2O60749 RNU2-64P-201ENST00000411315 191 ntBASIC1.89□□□□□ -2.11
SNX2O60749 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.89□□□□□ -2.11
SNX2O60749 RN7SKP164-201ENST00000516138 266 ntBASIC1.89□□□□□ -2.11
SNX2O60749 RNU6-1007P-201ENST00000516586 107 ntBASIC1.89□□□□□ -2.11
SNX2O60749 RNA5SP168-201ENST00000516642 112 ntBASIC1.89□□□□□ -2.11
SNX2O60749 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
SNX2O60749 AP002392.1-201ENST00000537692 208 ntBASIC1.89□□□□□ -2.11
SNX2O60749 MIR4762-201ENST00000585261 75 ntBASIC1.89□□□□□ -2.11
SNX2O60749 SNORA28-201ENST00000606769 126 ntBASIC1.89□□□□□ -2.11
SNX2O60749 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SNX2O60749 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNX2O60749 U8.5-201ENST00000364528 136 ntBASIC1.88□□□□□ -2.11
SNX2O60749 MT-TR-201ENST00000387439 65 ntBASIC1.88□□□□□ -2.11
SNX2O60749 AL606845.1-201ENST00000404881 255 ntBASIC1.88□□□□□ -2.11
SNX2O60749 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
SNX2O60749 RNU6-1219P-201ENST00000516143 112 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms