Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SMAD6O43541 MIR340-201ENST00000362125 95 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 Y_RNA.251-201ENST00000364551 99 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 RNU6-1336P-201ENST00000383886 109 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SMAD6O43541 U8.13-201ENST00000390842 128 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 SNORA75.5-201ENST00000391291 81 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 RNU2-48P-201ENST00000410694 191 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AC123900.1-201ENST00000420390 96 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AC010154.1-201ENST00000425857 269 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AL357134.1-201ENST00000445848 426 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AC093259.1-201ENST00000509755 300 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 RNU7-172P-201ENST00000517125 64 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 MIR378D2-201ENST00000580636 98 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AC104984.5-201ENST00000586878 94 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 AC011603.4-201ENST00000611325 277 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 TUG1_4.1-201ENST00000619464 181 ntBASIC1.98□□□□□ -2.09
SMAD6O43541 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.98□□□□□ -2.09
SMAD6O43541 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SMAD6O43541 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SMAD6O43541 Y_RNA.203-201ENST00000364106 102 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 Y_RNA.332-201ENST00000365271 113 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 RNU6-484P-201ENST00000384016 107 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 SNORD20-201ENST00000384550 80 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 MIR504-201ENST00000385065 83 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SMAD6O43541 SNORA79-201ENST00000408376 140 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SMAD6O43541 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 AC245102.2-201ENST00000448956 180 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 SNORA4.4-201ENST00000515921 135 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 RNU6-197P-201ENST00000516680 100 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 RNU2-56P-201ENST00000516826 190 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 SNORA48.11-201ENST00000517015 89 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 AP001328.1-201ENST00000528550 176 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SMAD6O43541 RPL23AP91-201ENST00000569211 455 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 AL359881.1-201ENST00000602916 267 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 MIR7843-201ENST00000622274 79 ntBASIC1.97□□□□□ -2.09
SMAD6O43541 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SMAD6O43541 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SMAD6O43541 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.09
SMAD6O43541 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 RNU6-597P-201ENST00000365620 102 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 Y_RNA.432-201ENST00000384087 111 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 RNU6-80P-201ENST00000384195 107 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 AL158823.1-201ENST00000418441 478 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 AC060773.1-201ENST00000421698 310 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 RNU6-856P-201ENST00000516959 98 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 AP001340.1-201ENST00000624405 217 ntBASIC1.96□□□□□ -2.1
SMAD6O43541 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.96□□□□□ -2.1
SMAD6O43541 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SMAD6O43541 RNU6-1209P-201ENST00000363655 107 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNU6-978P-201ENST00000364371 103 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 Y_RNA.273-201ENST00000364703 102 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNU6-915P-201ENST00000364943 103 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 Y_RNA.353-201ENST00000365440 108 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNU6-1080P-201ENST00000383982 107 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 MIR561-201ENST00000385216 97 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 MIR1253-201ENST00000408273 105 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNU2-55P-201ENST00000411146 174 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 HMGN2P34-201ENST00000437647 269 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNU4-57P-201ENST00000515980 135 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 RNU6-1299P-201ENST00000516316 100 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 Y_RNA.686-201ENST00000516548 134 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 AC011604.1-201ENST00000545978 196 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 uc_338.4-201ENST00000616635 176 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 U6.73-201ENST00000619194 103 ntBASIC1.95□□□□□ -2.1
SMAD6O43541 Y_RNA.91-201ENST00000363042 107 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 Y_RNA.796-201ENST00000364268 102 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 Y_RNA.799-201ENST00000364992 102 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 RNU6-215P-201ENST00000365169 102 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 SNORA40.18-201ENST00000391200 128 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 AC019129.1-201ENST00000403786 261 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.94□□□□□ -2.1
SMAD6O43541 SNORD11-201ENST00000459124 84 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.94□□□□□ -2.1
SMAD6O43541 SNORD77.4-201ENST00000516158 81 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 AC090142.3-201ENST00000519012 385 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 AL160236.1-201ENST00000556317 195 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 U7.2-201ENST00000607576 63 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
SMAD6O43541 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
SMAD6O43541 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SMAD6O43541 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMAD6O43541 Y_RNA.294-201ENST00000364916 102 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 Y_RNA.525-201ENST00000384570 113 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 Y_RNA.584-201ENST00000391090 114 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
SMAD6O43541 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms