Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SNORD115-43-201ENST00000365503 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 Y_RNA.360-201ENST00000365512 102 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-36-201ENST00000365629 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA2O43364 AC096949.1-201ENST00000412047 152 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORA59A-201ENST00000459326 152 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 RNA5SP57-201ENST00000459463 123 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 S100A11P2-201ENST00000467589 312 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA2O43364 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA2O43364 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA2O43364 RNU6-832P-201ENST00000363319 107 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 RNU4-67P-201ENST00000364569 141 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 RNA5SP109-201ENST00000391010 116 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 AL512326.2-201ENST00000426359 151 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 AC004941.2-201ENST00000427009 228 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 RNA5SP341-201ENST00000516261 117 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 AL513534.2-201ENST00000603836 250 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXA2O43364 AC027279.3-201ENST00000625055 122 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 MIR1255B1-201ENST00000636325 63 ntBASIC3.56□□□□□ -1.84
HOXA2O43364 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXA2O43364 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA2O43364 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA2O43364 MIR422A-201ENST00000362286 90 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 Y_RNA.96-201ENST00000363092 109 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA2O43364 MIR577-201ENST00000385196 96 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXA2O43364 UBBP3-201ENST00000445497 241 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXA2O43364 IGLV3-17-201ENST00000519099 244 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 MIR3169-201ENST00000578032 83 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 ZNF861P-201ENST00000588126 639 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA2O43364 U4atac.1-201ENST00000618345 95 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 MIR8054-201ENST00000620877 86 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 AC064859.1-201ENST00000624741 174 ntBASIC3.55□□□□□ -1.84
HOXA2O43364 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA2O43364 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA2O43364 RNU6-170P-201ENST00000362832 104 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 RN7SL863P-201ENST00000462370 296 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 AC091826.1-201ENST00000514065 313 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 Y_RNA.773-201ENST00000607168 90 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 AC095038.3-201ENST00000634439 195 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 AC244205.2-202ENST00000635781 342 ntBASIC3.54□□□□□ -1.84
HOXA2O43364 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA2O43364 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXA2O43364 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA2O43364 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA2O43364 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA2O43364 RNU6-461P-201ENST00000364195 107 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 RNY1P1-201ENST00000364372 112 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 SNORA18-201ENST00000384416 132 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 RNU6-644P-201ENST00000391155 98 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 SNORA11.2-201ENST00000408318 127 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 RNU6-795P-201ENST00000516323 103 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 RNU6-1116P-201ENST00000517269 99 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 IGLL4P-201ENST00000614590 133 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 U7.3-201ENST00000616123 62 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
HOXA2O43364 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXA2O43364 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXA2O43364 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA2O43364 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA2O43364 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA2O43364 SNORD56.5-201ENST00000364281 72 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 MIR1267-201ENST00000408723 78 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 RNU4-69P-201ENST00000410677 143 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 AC015922.2-201ENST00000435593 184 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 RNU2-11P-201ENST00000459191 187 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 RNU2-13P-201ENST00000515909 113 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 AL360157.1-201ENST00000565962 87 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 AC022254.1-201ENST00000567857 235 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 uc_338.1-201ENST00000612113 180 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 AC012531.4-201ENST00000616509 177 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 MIR3202-2-201ENST00000635980 79 ntBASIC3.52□□□□□ -1.85
HOXA2O43364 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA2O43364 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA2O43364 SNORD77B-201ENST00000391112 67 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 POLR2J4-204ENST00000418424 324 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 MRPL35P3-201ENST00000421557 364 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 RNU7-113P-201ENST00000459273 62 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXA2O43364 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 AL449363.1-201ENST00000617815 186 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 AC092881.1-201ENST00000638218 2733 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 AC096644.4-201ENST00000563417 2912 ntBASIC3.51□□□□□ -1.85
HOXA2O43364 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HOXA2O43364 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HOXA2O43364 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA2O43364 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXA2O43364 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXA2O43364 MIRLET7C-201ENST00000362160 84 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 SNORD45B-201ENST00000364617 72 ntBASIC3.5□□□□□ -1.85
HOXA2O43364 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms