Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MIR4753-201ENST00000585119 83 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 AL078603.1-201ENST00000603824 313 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 AC090517.3-201ENST00000625170 141 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
FOXN1O15353 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.5□□□□□ -2.01
FOXN1O15353 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
FOXN1O15353 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.49□□□□□ -2.01
FOXN1O15353 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 RNU6-1164P-201ENST00000364428 107 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 RNU6-975P-201ENST00000384296 105 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 RNA5SP89-201ENST00000410300 108 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 RNU2-55P-201ENST00000411146 174 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 AC010531.2-201ENST00000465012 153 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 ATP5EP1-201ENST00000510257 156 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 RNA5SP182-201ENST00000516064 82 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 RNA5SP220-201ENST00000516298 104 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 SCARNA16.3-201ENST00000516595 184 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 AC015720.1-201ENST00000565251 277 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 AL929325.1-201ENST00000603096 117 ntBASIC2.49□□□□□ -2.01
FOXN1O15353 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.49□□□□□ -2.01
FOXN1O15353 Y_RNA.191-201ENST00000363972 113 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 MIR29B2-201ENST00000385055 81 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 MIR1294-201ENST00000408503 142 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXN1O15353 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXN1O15353 RNU2-60P-201ENST00000517290 128 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXN1O15353 AL160236.1-201ENST00000556317 195 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 MIR4452-201ENST00000583004 71 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 AC131055.1-201ENST00000584626 316 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 AL670379.3-201ENST00000605040 251 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 MIR7515-201ENST00000637837 67 ntBASIC2.48□□□□□ -2.01
FOXN1O15353 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
FOXN1O15353 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXN1O15353 ZNF355P-201ENST00000427301 3216 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 Y_RNA.35-201ENST00000362601 101 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 Y_RNA.91-201ENST00000363042 107 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 RNU6-944P-201ENST00000364023 107 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 RNU6-309P-201ENST00000364573 106 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 SNORD58C-201ENST00000365223 64 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 RNU6-117P-201ENST00000365415 107 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 RNU6-168P-201ENST00000516189 101 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 AC009831.4-201ENST00000620744 325 ntBASIC2.47□□□□□ -2.01
FOXN1O15353 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXN1O15353 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
FOXN1O15353 Y_RNA.178-201ENST00000363832 102 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 RNU4-13P-201ENST00000364019 141 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 RNU6-234P-201ENST00000365229 104 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 RNU1-109P-201ENST00000383960 147 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 RNU6-418P-201ENST00000384035 107 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 SNORD116-21-201ENST00000384507 92 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 MIR548A3-201ENST00000385297 97 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 Z96811.1-201ENST00000445880 108 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 RNU6-781P-201ENST00000516377 101 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 Y_RNA.690-201ENST00000516603 95 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 AC025647.1-201ENST00000517879 253 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXN1O15353 RPL23AP91-201ENST00000569211 455 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 MIR7157-201ENST00000635801 60 ntBASIC2.46□□□□□ -2.02
FOXN1O15353 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
FOXN1O15353 RNU6-461P-201ENST00000364195 107 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 Y_RNA.634-201ENST00000364811 113 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 Y_RNA.309-201ENST00000365046 111 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 SNORA72-201ENST00000384339 132 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 RNU6-1274P-201ENST00000384557 107 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 AL603914.1-201ENST00000401964 204 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 RNU2-70P-201ENST00000410718 179 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 Y_RNA.617-201ENST00000410920 90 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 RPS26P45-201ENST00000471748 340 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 RNA5SP112-201ENST00000515937 99 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 RNA5SP200-201ENST00000516360 103 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 RNA5SP153-201ENST00000516498 76 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 DNAJC19P9-201ENST00000555084 351 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 AC103810.1-201ENST00000579873 453 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 MIR3616-201ENST00000584070 92 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 MIR4765-201ENST00000585007 77 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 uc_338.4-201ENST00000616635 176 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 AC095038.3-201ENST00000634439 195 ntBASIC2.45□□□□□ -2.02
FOXN1O15353 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.45□□□□□ -2.02
FOXN1O15353 AC008555.8-201ENST00000623602 2168 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
FOXN1O15353 RNU6-486P-201ENST00000363116 107 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 Y_RNA.203-201ENST00000364106 102 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 SNORD18B-201ENST00000365659 72 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 MIR627-201ENST00000384979 97 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 AC016909.1-201ENST00000415916 166 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 SNORD77.4-201ENST00000516158 81 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 SNORA72.7-201ENST00000516349 94 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 RNU6-948P-201ENST00000516374 107 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 MIR4303-201ENST00000581299 66 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 AC006254.2-201ENST00000603259 279 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 AL121890.5-201ENST00000620848 304 ntBASIC2.44□□□□□ -2.02
FOXN1O15353 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
FOXN1O15353 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXN1O15353 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms