Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU2-56P-201ENST00000516826 190 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 AC006504.6-201ENST00000590142 199 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.47-201ENST00000362697 108 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 RNU4-90P-201ENST00000362773 141 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.265-201ENST00000364677 108 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.276-201ENST00000364732 109 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 SNORD1A-201ENST00000364968 72 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 RNA5SP259-201ENST00000365541 109 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.461-201ENST00000384263 103 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 AL390729.2-201ENST00000416137 156 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 BTF3P11-201ENST00000426582 477 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 NDUFA4P2-201ENST00000489989 244 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
TRIM49D1C9J1S8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-1272P-201ENST00000362776 107 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.136-201ENST00000363444 102 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.145-201ENST00000363527 102 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.162-201ENST00000363683 102 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-360P-201ENST00000390944 104 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 MLLT10P1-201ENST00000418346 262 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AC114811.1-201ENST00000507207 168 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 RNU7-115P-201ENST00000516433 55 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-922P-201ENST00000516753 99 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 POLR3GP1-201ENST00000594073 261 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AC005972.2-201ENST00000604690 348 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 MIR8070-201ENST00000616510 88 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 MIR548AY-201ENST00000617669 107 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AL121890.5-201ENST00000620848 304 ntBASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM49D1C9J1S8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AC117470.1-201ENST00000381974 330 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 SNORD41-201ENST00000386967 70 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 TRBVB-201ENST00000477100 408 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 HMGN1P7-201ENST00000491722 313 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 RPL23AP54-201ENST00000495129 419 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 SNORA70.12-201ENST00000516084 153 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 RNU2-31P-201ENST00000516954 155 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-165P-201ENST00000517170 99 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AP002004.2-201ENST00000531656 154 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AC127455.1-201ENST00000565496 145 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AC012433.1-201ENST00000588916 398 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AP003357.1-201ENST00000604497 148 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 MIR8062-201ENST00000621515 85 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 SNORD3E-202ENST00000627253 216 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 snoU18.1-201ENST00000629629 71 ntBASIC1.03□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.217-201ENST00000364214 105 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-740P-201ENST00000364734 105 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 SNORD50B-201ENST00000364995 70 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.456-201ENST00000384232 111 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.477-201ENST00000384352 108 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 MIR522-201ENST00000385071 87 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 MIR516B2-201ENST00000385190 85 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 MIR660-201ENST00000385235 97 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 SNORD72-201ENST00000390994 80 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 AC069257.2-201ENST00000441819 155 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.641-201ENST00000459414 105 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 RPL30P7-201ENST00000479312 323 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 SERF1AP1-201ENST00000514575 187 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.02□□□□□ -2.25
TRIM49D1C9J1S8 SNORD114-7-201ENST00000362520 77 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 SNORA72-201ENST00000384339 132 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 MIR520G-201ENST00000385064 90 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 SNORA36B-201ENST00000410438 131 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 MRPL35P3-201ENST00000421557 364 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 AC136628.3-201ENST00000521868 290 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 MIR3684-201ENST00000579779 74 ntBASIC1.01□□□□□ -2.25
TRIM49D1C9J1S8 SNORA25.1-201ENST00000362326 128 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.76-201ENST00000362931 109 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.203-201ENST00000364106 102 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-1323P-201ENST00000384025 107 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-1289P-201ENST00000384431 106 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 AL603910.2-201ENST00000407268 136 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 MTCYBP9-201ENST00000431021 303 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 AC027119.1-201ENST00000440877 241 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms