Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC079781.2-201ENST00000446424 169 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RPL39P25-201ENST00000449384 154 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC091951.3-201ENST00000504093 246 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC005178.1-201ENST00000508392 440 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU6-927P-201ENST00000516199 100 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU7-43P-201ENST00000516554 64 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 SNRPGP1-201ENST00000553864 222 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AL359881.1-201ENST00000602916 267 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 Z99497.2-201ENST00000603634 310 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC011603.4-201ENST00000611325 277 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC138649.3-201ENST00000622154 254 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 SNORA33-201ENST00000363664 130 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC008134.1-201ENST00000420943 193 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AL353572.1-201ENST00000442490 417 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AL356055.1-201ENST00000602528 446 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AL731768.1-201ENST00000603124 139 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.27□□□□□ -2.61
COL6A5A8TX70 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 RNU6-949P-201ENST00000384040 107 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 SNORD41.1-201ENST00000391000 69 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 AC091951.2-201ENST00000500762 203 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 AL355375.2-201ENST00000574825 175 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 OR4H6P-202ENST00000603819 340 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 MIR6740-201ENST00000618268 113 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 AL138960.2-201ENST00000625145 535 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 U6.107-201ENST00000637108 79 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 SNORD116-20-201ENST00000384529 92 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.28□□□□□ -2.61
COL6A5A8TX70 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 RPL30P10-201ENST00000488148 337 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 RNU6-107P-201ENST00000516643 102 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 AC069113.1-201ENST00000517763 267 ntBASIC-1.28□□□□□ -2.61
COL6A5A8TX70 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 RNU6-926P-201ENST00000384075 107 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 MIR548I3-201ENST00000408378 149 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.29□□□□□ -2.62
COL6A5A8TX70 MTCO1P31-201ENST00000506355 492 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 RNU6-572P-201ENST00000516724 80 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 RNU7-161P-201ENST00000517289 62 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AP002795.1-201ENST00000534879 84 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.29□□□□□ -2.62
COL6A5A8TX70 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 MIR8066-201ENST00000617280 78 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AC092608.3-201ENST00000625017 386 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 SNORA1B-201ENST00000362535 133 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 SNORD115-4-201ENST00000363810 82 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 SNORD115-31-201ENST00000365318 82 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AC104850.1-201ENST00000435940 476 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AC114982.2-201ENST00000461396 358 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.29□□□□□ -2.62
COL6A5A8TX70 MIR4473-201ENST00000583731 91 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 uc_338.4-201ENST00000616635 176 ntBASIC-1.29□□□□□ -2.62
COL6A5A8TX70 RNU6-800P-201ENST00000384473 103 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 SNORD93-201ENST00000408813 74 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNA5SP390-201ENST00000410191 113 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 AC005002.2-201ENST00000438228 269 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.3□□□□□ -2.62
COL6A5A8TX70 VN1R88P-201ENST00000596787 292 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 AL391834.2-201ENST00000609982 546 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 AL445523.1-201ENST00000451184 1362 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 MIRLET7C-201ENST00000362160 84 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-873P-201ENST00000363833 107 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 SNORD14.1-201ENST00000365609 90 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-442P-201ENST00000383968 104 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-932P-201ENST00000391108 106 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 AL365338.1-201ENST00000422282 858 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 FGF7P4-201ENST00000509595 295 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU2-34P-201ENST00000516534 121 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 VN1R87P-201ENST00000596706 487 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 AC073648.5-201ENST00000603502 305 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 MIR548AY-201ENST00000617669 107 ntBASIC-1.3□□□□□ -2.62
COL6A5A8TX70 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 AL359634.1-202ENST00000404721 284 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 AC090960.1-201ENST00000421072 306 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 MTATP6P13-201ENST00000438531 667 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 MIR4464-201ENST00000580818 92 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 RNU6-737P-201ENST00000365370 107 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 RNU6-843P-201ENST00000384454 104 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 RNU6-417P-201ENST00000384712 107 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 SNORA75.4-201ENST00000391278 119 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.31□□□□□ -2.62
COL6A5A8TX70 RNU6-227P-201ENST00000362865 103 ntBASIC-1.32□□□□□ -2.62
COL6A5A8TX70 MIR539-201ENST00000365690 78 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms