Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNU1-70P-201ENST00000362618 164 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 RNU6-833P-201ENST00000363486 107 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 SNORA1.1-201ENST00000364671 133 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 RNU6-805P-201ENST00000365643 106 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 SNORD21-201ENST00000383953 95 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 RNU6-24P-201ENST00000384440 107 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 RN7SKP192-201ENST00000411291 327 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.59□□□□□ -1.83
RCCD1A6NED2 MIR6841-201ENST00000637129 72 ntBASIC3.59□□□□□ -1.83
RCCD1A6NED2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
RCCD1A6NED2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.59□□□□□ -1.84
RCCD1A6NED2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RCCD1A6NED2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.58□□□□□ -1.84
RCCD1A6NED2 MIR148B-201ENST00000362252 99 ntBASIC3.58□□□□□ -1.84
RCCD1A6NED2 SNORA73.2-201ENST00000364946 201 ntBASIC3.58□□□□□ -1.84
RCCD1A6NED2 AC069257.2-201ENST00000441819 155 ntBASIC3.58□□□□□ -1.84
RCCD1A6NED2 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
RCCD1A6NED2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.58□□□□□ -1.84
RCCD1A6NED2 AC103810.6-201ENST00000606708 136 ntBASIC3.58□□□□□ -1.84
RCCD1A6NED2 U4atac.1-201ENST00000618345 95 ntBASIC3.58□□□□□ -1.84
RCCD1A6NED2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RCCD1A6NED2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RCCD1A6NED2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.57□□□□□ -1.84
RCCD1A6NED2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RCCD1A6NED2 Y_RNA.370-201ENST00000365589 108 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 SNORD58A-201ENST00000383875 65 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AL034345.1-201ENST00000407768 123 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 CYCSP4-201ENST00000429682 331 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 RNU7-67P-201ENST00000459003 62 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AC108729.3-201ENST00000513484 108 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.57□□□□□ -1.84
RCCD1A6NED2 DNAJC19P9-201ENST00000555084 351 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AC019288.1-201ENST00000557918 224 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AC017071.1-201ENST00000564407 2204 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AL121772.2-201ENST00000614331 297 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AC073476.4-201ENST00000628409 72 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.57□□□□□ -1.84
RCCD1A6NED2 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
RCCD1A6NED2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RCCD1A6NED2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RCCD1A6NED2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RCCD1A6NED2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RCCD1A6NED2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RCCD1A6NED2 RNU6-1019P-201ENST00000364424 107 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 MIR670-201ENST00000390142 98 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 MIR1270-201ENST00000459320 83 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 RPS27P29-201ENST00000463110 252 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 AC025518.1-201ENST00000479856 347 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 SNORA31.10-201ENST00000516482 106 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 RNU6-958P-201ENST00000516995 106 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 IGKV2-26-201ENST00000518305 343 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 AC005786.1-201ENST00000588553 154 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 AC069114.2-201ENST00000604699 304 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.56□□□□□ -1.84
RCCD1A6NED2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RCCD1A6NED2 AC007336.1-201ENST00000576365 3828 ntBASIC3.56□□□□□ -1.84
RCCD1A6NED2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RCCD1A6NED2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RCCD1A6NED2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RCCD1A6NED2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RCCD1A6NED2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RCCD1A6NED2 Y_RNA.430-201ENST00000384081 110 ntBASIC3.55□□□□□ -1.84
RCCD1A6NED2 RNY1P4-201ENST00000384595 115 ntBASIC3.55□□□□□ -1.84
RCCD1A6NED2 U8.15-201ENST00000390947 134 ntBASIC3.55□□□□□ -1.84
RCCD1A6NED2 U8.16-201ENST00000391279 133 ntBASIC3.55□□□□□ -1.84
RCCD1A6NED2 AC008739.3-201ENST00000603262 127 ntBASIC3.55□□□□□ -1.84
RCCD1A6NED2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.55□□□□□ -1.84
RCCD1A6NED2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RCCD1A6NED2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.54□□□□□ -1.84
RCCD1A6NED2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCCD1A6NED2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.54□□□□□ -1.84
RCCD1A6NED2 RNA5SP124-201ENST00000362739 110 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 RNU6-461P-201ENST00000364195 107 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 RNU6-950P-201ENST00000384651 107 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 SNORA26.6-201ENST00000391256 115 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 RNA5SP229-201ENST00000410809 99 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 RPS29P29-201ENST00000456396 171 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 RNU7-34P-201ENST00000459394 64 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 SNORA70.14-201ENST00000516205 110 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 AC026271.5-201ENST00000577873 130 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 AC022513.1-201ENST00000624512 117 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 MIR4662A-201ENST00000637499 67 ntBASIC3.54□□□□□ -1.84
RCCD1A6NED2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RCCD1A6NED2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCCD1A6NED2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCCD1A6NED2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
RCCD1A6NED2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RCCD1A6NED2 RNU4-35P-201ENST00000362588 141 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 RNA5SP383-201ENST00000362934 120 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 MIR452-201ENST00000385020 85 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RCCD1A6NED2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RCCD1A6NED2 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 SNORD105B-201ENST00000458770 79 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 RNU7-12P-201ENST00000516030 62 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms